Protein Overview: HN1BA_DANRE

General Information:
Name(s) found:	HN1BA_DANRE [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|49533610\|ref\|NP_571955.2\| HNF1 homeobox b [Danio rerio] [NCBI NR] gi\|49473130\|gb\|AAL48193.2\|AF244140_1 hepatocyte nuclear factor 1-beta [Danio rerio] [NCBI NR] gi\|49473128\|gb\|AAR02405.1\| hepatocyte nuclear factor 1-beta-2 [Danio rerio] [NCBI NR] gi\|193806156\|sp\|A1L1N5.2\|HNF1B_DANRE RecName: Full=Hepatocyte nuclear factor 1-beta; Short=HNF-1-beta; Short=HNF-1B; AltName: Full=Transcription factor 2; Short=TCF-2; AltName: Full=Variant hepatic nuclear factor 1; Short=vHNF1 [NCBI NR] Hepatocyte nuclear factor 1-beta OS=Danio rerio GN=hnf1b PE=2 SV=2 [Swiss-Prot] Hepatocyte nuclear factor 1-beta-A OS=Danio rerio GN=hnf1ba PE=2 SV=2 [Swiss-Prot] transcription factor 2, hepatic [071204_hmrz_cont.fasta] transcription factor 2, hepatic [Danio rerio]gi\|49473130\|gb\|AAL48193.2\| hepatocyte nuclear factor 1-beta [Danio rerio]gi\|49473128\|gb\|AAR02405.1\| hepatocyte nuclear factor 1-beta-2 [Danio rerio] [nrdb_11152004_Chlamydomonas] hepatocyte nuclear factor 1-beta [Danio rerio] [nr-271106-contam.fasta] transcription factor 2, hepatic [Danio rerio] [nr-271106-contam.fasta] hepatocyte nuclear factor 1-beta-2 [Danio rerio] [nr-271106-contam.fasta] RecName: Full=Hepatocyte nuclear factor 1-beta-A; Short=HNF-1-beta-A; Short=HNF-1B-A; AltName: Full=Hepatocyte nuclear factor 1-beta-2; Short=HNF-1B-2; AltName: Full=Transcription factor 2; Short=TCF-2; AltName: Full=Variant hepatic nuclear factor 1; Short=vHNF1 [NCBI_RefSeq_D_rerio_20120531_05-31-2012_reversed.fasta]
Organism:	Danio rerio
Length:	559 amino acids
Gene Ontology:
Cellular Component:	nucleus [IC][IEA]
Biological Process:	transcription [IEA] multicellular organismal development [IEA] anterior/posterior pattern formation [IGI][IMP] positive regulation of transcription [IEA] regulation of transcription, DNA-dependent [IEA] digestive tract morphogenesis [IMP] rhombomere 6 morphogenesis [IMP] regulation of transcription [IEA] otic placode formation [IMP] hindbrain morphogenesis [IMP] rhombomere 5 morphogenesis [IMP] rhombomere 5 development [IMP] rhombomere 6 development [IMP] embryonic gut development [IMP] semicircular canal morphogenesis [IMP] otolith development [IGI] hindbrain development [IMP] otic vesicle formation [IMP] liver development [IMP] otolith morphogenesis [IMP] endoderm formation [IDA] tube formation [IMP] pancreas development [IMP]
Molecular Function:	DNA binding [IEA][ISS] transcription factor activity [IEA][ISS] sequence-specific DNA binding [IEA] protein dimerization activity [ISS] transcription activator activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFANMVSKLT SLQQELLSAL LDSGVTKDVL LQALEDLDPS PSAFGVKLDS LQMSPSGSKL  60
   61 SDTDSKPVFH TLTNGHSKGK LSGDEGSEDG DDYDTPPILK ELQSQNTEEA AEQRAEIERM 120
  121 LAEDPWRAAR MIKGYMQQHN IPQREVVDVT GLNQSHLSQH LNKGTPMKTQ KRAALYTWYV 180
  181 RKQREILRQF NQATQGSGAT MLDKGNQDQV LLFFSEFSQS GQGMVQPGDD AAIEPACKKL 240
  241 RRNRFKWGPA SQQILYQAYE RQKNPSKEER EALVEECNRA ECLQRGVSPS KAHGLGSNLV 300
  301 TEVRVYNWFA NRRKEEAFRQ KLAMDAYSGP AHSLNSLLSH SSPHHPQTSS SPPSKMQGVR 360
  361 YSQQGPGEVT SSTTINHHSS NAMSTSQSVL QQVSPGALDP SHSLLSPDAK MISVSGGGLP 420
  421 PVSTLTNIHA SHHVHQQTPN LIMPLSGVMA IAQSLNTSQA QTVPVINSVA GSLAALQPVQ 480
  481 FSQQLNSQHQ QLMQQSSGHM SQQSFMASVS HSHMYPHKQE PPQYSHSSRF PPAMVVTDAN 540
  541 SLSTLSSMSS SKQCPLQAW

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.93

Protein Overview: HN1BA_DANRE

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: