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Protein Overview: CAPZB_RAT

General Information:
Name(s) found: CAPZB_RAT [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • F-actin-capping protein subunit beta OS=Rattus norvegicus GN=Capzb PE=1 SV=1 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 272 amino acids

    Gene Ontology:
    Cellular Component: cytoskeleton [IEA]
    cytoplasm [IEA]
    membrane [UNKNOWN]
    WASH complex [UNKNOWN][ISS]
    F-actin capping protein complex [IEA]
    lamellipodium [UNKNOWN]
    cortical cytoskeleton [UNKNOWN]
    Biological Process: actin filament capping [IEA]
    cell projection organization [UNKNOWN]
    lamellipodium assembly [UNKNOWN]
    actin cytoskeleton organization [IEA]
    Molecular Function: protein binding [UNKNOWN][IPI]
    actin binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDQQLDCAL DLMRRLPPQQ IEKNLSDLID LVPSLCEDLL SSVDQPLKIA RDKVVGKDYL  60
   61 LCDYNRDGDS YRSPWSNKYD PPLEDGAMPS ARLRKLEVEA NNAFDQYRDL YFEGGVSSVY 120
  121 LWDLDHGFAG VILIKKAGDG SKKIKGCWDS IHVVEVQEKS SGRTAHYKLT STVMLWLQTN 180
  181 KSGSGTMNLG GSLTRQMEKD ETVSDCSPHI ANIGRLVEDM ENKIRSTLNE IYFGKTKDIV 240
  241 NGLRSVQTFA DKSKQEALKN DLVEALKRKQ QC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..272] PSI-BLAST 137.0 Capz beta-1 subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • actin binding
    		•  6.56144513012007 bayes_pls_golite062009
  • actin filament binding
    		•  5.39928513902709 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  5.10504476256679 bayes_pls_golite062009
  • binding
    		•  2.46279312857752 bayes_pls_golite062009
  • protein binding
    		•  1.31870344025745 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle