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Protein Overview: K1043_MOUSE, TTC...

General Information:
Name(s) found: TTC28_MOUSE [Swiss-Prot]
K1043_MOUSE [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • Tetratricopeptide repeat protein 28 OS=Mus musculus GN=Ttc28 PE=2 SV=2 [Swiss-Prot]
  • (Q80XJ3) TPR repeat-containing protein KIAA1043 [Swiss-Prot]
    • Organism: Mus musculus
    Length: 1691 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: binding [IEA]
    molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQKYDKALG YHTQELEVYQ ELSDLPGECR AHGHLAAVYM ALGKYTMAFK CYQEQLELGR  60
   61 KLKEPSLEAQ VYGNMGITKM NMNVMEDAIG YFEQQLAMLQ QLSGNESVLD RGRAYGNLGD 120
  121 CYEALGDYEE AIKYYEQYLS VAQSLNRMQD QAKAYRGLGN GHRATGSLQQ ALVCFEKRLV 180
  181 VAHELGEASN KAQAYGELGS LHSQLGNYEQ AISCLERQLN IARDMKDRAL ESDAACGLGG 240
  241 VYQQMGEYDT ALQYHQLDLQ IAEETDNPTC QGRAYGNLGL TYESLGTFER AVVYQEQHLS 300
  301 IAAQMNDLVA KTVSYSSLGR THHALQNYSQ AVMYLQEGLR LAEQLGRRED EAKIRHGLGL 360
  361 SLWASGNLEE AQHQLYRASA LFETIRHEAQ LSTDYKLSLF DLQTSSYQAL QRVLVSLGHH 420
  421 DEALAVAERG RTRAFADLLV ERQTGQQDSD PYSPITIDQI LEMVNAQRGL VLYYSLAAGY 480
  481 LYSWLLAPGA GILKFHEHYL GDNSVESSSD FQAGSSAALP VATNSTLEQH IASVREALGV 540
  541 ESYYSRACAS SETESEAGDI MEQQLEEMNK QLNSVTDPTG FLRMVRHNNL LHRSCQSMTS 600
  601 LFSGTVSPSK DGTSSLPRRQ NSLAKPPLRA LYDLLIAPME GGLMHSSGPV GRHRQLVLVL 660
  661 EGELYFVPFA LLKGSASNEY LYERFTLIAV PAVRSLGPHS KCHLRKTPPT YSSSTTMAAV 720
  721 IGNPKLPSAV MDRWLWGPMP SAEEEAFMVS ELLGCQPLVG SMATKERVMS ALTQAECVHF 780
  781 ATHVSWKLSA LVLTPNTEGN PAGSKSSFGH PYTIPESLRV QDDASDVESI SDCPPLRELL 840
  841 LTAADLLDLR LSVKLVVLSS SQEANGRVTA DGLVALTRAF LAAGAQCVLV ALWPVPVAAS 900
  901 KMFVHAFYSS LLNGLKASAS LGEAMKVVQS SKAFSHPSNW AGFTLIGSDV KLNSPSSLIG 960
  961 QALTEILQHP ERARDALRVL LHLVEKSLQR IQNGQRNAMY TSQQSVENKV GGIPGWQALL1020
 1021 TAVGFRLDPA ASGLPAAVFF PTSDPGDRLQ QCSSTLQALL GLPNPALQAL CKLITASETG1080
 1081 EQLISRAVKN MVGMLHQVLV QLQACEKEQD FASAPIPVSL SVQLWRLPGC HEFLAALGFD1140
 1141 LCEVGQEEVI LKTGKQASRR TTHFALQSLL SLFDSTELPK RLSLDSSSSL ESLASAQSVS1200
 1201 NALPLGYQHP PFSPTGADSI ASDAISVYSL SSIASSMSFV SKPEGGLEGG GPRGRQDYDR1260
 1261 SKSTHPQRAT LPRRQTSPQA RRGASKEEEE YEGFSIISME PLATYQGEGK TRFSPDPKQP1320
 1321 CVKAPGGVRL SVSSKGSVST PNSPVKMTLI PSPNSPFQKV GKLASSDTGE SDQSSTETDS1380
 1381 TVKSQEESTP KLDPQELAQR ILEETKSHLL AVERLQRSGG PAGPDREDSV VAPSSTTVFR1440
 1441 ASETSAFSKP ILSHQRSQLS PLTVKPQPPA RSSSLPKVSS PATSEVSGKD GLSPPGSSHP1500
 1501 SPGRDTPVSP ADPPLFRLKY PSSPYSAHIS KSPRNTSPAC SAPSPALSYS SAGSARSSPA1560
 1561 DAPDEKVQAV HSLKMLWQST PQPPRGPRKT CRGAPGTLTS KRDVLSLLNL SPRHGKEEGG1620
 1621 ADRLELKELS VQRHDEVPPK VPTNGHWCTD TATLTTAGGR STTAAPRPLR LPLANGYKFL1680
 1681 SPGRLFPSSK C

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..418] PSI-BLAST 78.39794 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.
    2 View Details [419..675] PSI-BLAST 4.0 Crystal structure of the N-terminal domain of human SMG7
    3 View Details [676..788] deduced N/A No confident structure predictions are available.
    4 View Details [789..950] deduced N/A No confident structure predictions are available.
    5 View Details [951..1062] deduced N/A No confident structure predictions are available.
    6 View Details [1063..1691] PSI-BLAST 6.221849 No description for 1y0fA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle