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Protein Overview: CG1407-PA

General Information:
Name(s) found: CG1407-PA / FBpp0087522 [FlyBase]
Description(s) found:
Found 19 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG1407 (CG1407, FBgn0033474). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:5915948..5920393. It has the cytological map location 46D5-46D7. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: zinc ion binding. The biological processes in which it is involved are not known. 5 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 443 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNDDHRRRK TPCGFCMAVF KWIPVLFITA VIAWSYYAYV VELCIRNSEN RIGMIFMLLF  60
   61 YHLFLTLFMW SYWRTIMTSV GRIPDQWRIP DEEVSRLFRA DSPDTQKRIL NNFARDLPVT 120
  121 NRTMNGSVRF CEKCKIIKPD RAHHCSVCSC CVLKMDHHCP WVNNCVNFYN YKYFVLFLGY 180
  181 ALVYCLYVAF TSLHDFVEFW KVGAGQLNAS GMGRFHILFL FFIAIMFAIS LVSLFGYHIY 240
  241 LVLVNRTTLE SFRAPIFRVG GPDKNGYNLG RYANFCEVFG DDWQYWFLPV FSSRGDGYSY 300
  301 PTSSDQSRVS TSSPTQRYDA MGDTTTSRLD GNPTDKLIGA SPLDTTNHHH NQSPHQVRST 360
  361 SVLPTQLLQI QPPSTCRDEL NERQQKLANG QSLDCSTPAA MSSPDERGVN GAAVYIEMIG 420
  421 DHPLTSADPA KGFPRPPNGD LPV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..116] MSA 1.551997 View MSA. No confident structure predictions are available.
    2 View Details [117..244] Pfam 26.136677 No description for PF01529.11 was found. No confident structure predictions are available.
    3 View Details [245..302] MSA 4.597995 View MSA. No confident structure predictions are available.
    4 View Details [303..443] MSA 7.178997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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