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View Structure Prediction Details

Protein: CG1407-PA
Organism: Drosophila melanogaster
Length: 443 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG1407-PA.

Description E-value Query
Range
Subject
Range
gi|15292047 - gi|15292047|gb|AAK93292.1| LD36375p [Drosophila melanogaster]
310.0 [0..124] [443..1]

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Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNDDHRRRK TPCGFCMAVF KWIPVLFITA VIAWSYYAYV VELCIRNSEN RIGMIFMLLF  60
   61 YHLFLTLFMW SYWRTIMTSV GRIPDQWRIP DEEVSRLFRA DSPDTQKRIL NNFARD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [117-244]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPVTNRTMNG SVRFCEKCKI IKPDRAHHCS VCSCCVLKMD HHCPWVNNCV NFYNYKYFVL  60
   61 FLGYALVYCL YVAFTSLHDF VEFWKVGAGQ LNASGMGRFH ILFLFFIAIM FAISLVSLFG 120
  121 YHIYLVLV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 26.136677
Match: PF01529.11
Description: No description for PF01529.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [245-302]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NRTTLESFRA PIFRVGGPDK NGYNLGRYAN FCEVFGDDWQ YWFLPVFSSR GDGYSYPT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [303-443]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSDQSRVSTS SPTQRYDAMG DTTTSRLDGN PTDKLIGASP LDTTNHHHNQ SPHQVRSTSV  60
   61 LPTQLLQIQP PSTCRDELNE RQQKLANGQS LDCSTPAAMS SPDERGVNGA AVYIEMIGDH 120
  121 PLTSADPAKG FPRPPNGDLP V

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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