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Protein Overview: FBpp0297097, CG1...

General Information:
Name(s) found: FBpp0297097 [FlyBase]
CG13334-PA / FBpp0086797 [FlyBase]
Description(s) found:
Found 24 descriptions.
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  • type=protein; loc=2R:9446072..9447157; ID=FBpp0297097; name=CG13334-PB; parent=FBgn0033856,FBtr0305955; dbxref=REFSEQ:NP_001246301,GB_protein:AFH08055,FlyBase:FBpp0297097,FlyBase_Annotation_IDs:CG13334-PB; MD5=4e15b3f27d17333e7a386d52f8b835ba; length=361; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG13334 (CG13334, FBgn0033856). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:9446050..9447610. It has the cytological map location 50B1-50B2. Based on sequence similarity, it is predicted to have molecular function</span>: L-lactate dehydrogenase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: oxidation reduction; glycolysis. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 361 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: glycolysis [IEA]
    oxidation reduction [IEA]
    Molecular Function: L-lactate dehydrogenase activity [ISS]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPIQLIRLN MPHFRAKTWN TKAMSTKSVK SCFAKSMRPM KEFKRPRISK ISVVGAGQVG  60
   61 TAISAMLLLR NLTKNLVILD INYELAKAEA LDFQHASAFL SDARVVPCGD STNSKDSDVV 120
  121 IITAGARPSG KDRSRLAAMQ KTVEILKKAV PKLVELSPNA TFIIISNPAD VMTYAVQRIT 180
  181 NLPKHRCFTT GCHLDTVRFR NLIANRLRLP PSQVHGYVIG EHGASAVPVW SSVSIAGIRL 240
  241 NDVVKNLACG DDPENWAKIN KQVTTGGLAV AKTKGYTNWA IALTCADIVQ AMSGGKGKIA 300
  301 CVGTDMKGLN GIQDNVVLSL PCLVTAGGIS HVFELPLTDV EQSKLLASAN ILLEAQCSLS 360
  361 I

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..361] PSI-BLAST 101.0 Lactate dehydrogenase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • L-lactate dehydrogenase activity
    		•  2.59062377380589 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • alcohol dehydrogenase (NAD) activity
    		•  1.27032644348698 bayes_pls_golite062009
  • retinol dehydrogenase activity
    		•  1.16811519855038 bayes_pls_golite062009
  • binding
    		•  0.982999356179965 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.9367410227151 bayes_pls_golite062009
  • NAD or NADH binding
    		•  0.74536049628503 bayes_pls_golite062009
  • alcohol dehydrogenase activity, zinc-dependent
    		•  0.729242797855749 bayes_pls_golite062009
  • fatty acid synthase activity
    		•  0.714637370305282 bayes_pls_golite062009
  • DNA binding
    		•  0.525227236870065 bayes_pls_golite062009
  • protein binding
    		•  0.507836099271263 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.459537641913493 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  0.418775403210681 bayes_pls_golite062009
  • coenzyme binding
    		•  0.35922330382799 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.32207755075663 bayes_pls_golite062009
  • 3-oxoacyl-[acyl-carrier-protein] reductase activity
    		•  0.192594057004213 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.177044638410302 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.0433763403499039 bayes_pls_golite062009
  • signal transducer activity
    		•  0.0433763403499039 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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