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Protein Overview: Vha100-1-PH

General Information:
Name(s) found: Vha100-1-PH / FBpp0084747 [FlyBase]
Description(s) found:
Found 12 descriptions.
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  • The gene Vha100-1 is referred to in FlyBase by the symbol Dmel\Vha100-1 (CG1709, FBgn0028671). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:24956772..24963702. It has the cytological map location 98F12. There is experimental evidence that it has the molecular function</span>: calmodulin binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: ATP synthesis coupled proton transport. 10 alleles are reported. No phenotypic data is available. It has 10 annotated transcripts and 10 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 825 amino acids

    Gene Ontology:
    Cellular Component: vacuolar proton-transporting V-type ATPase, V0 domain [ISS]
    synapse [IDA]
    Biological Process: ATP synthesis coupled proton transport [IEA]
    Molecular Function: calmodulin binding [IDA]
    hydrogen-exporting ATPase activity, phosphorylative mechanism [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTCHGHTRFI VRKFVGCWSL WTNLYLIFKH LLNPDVNAFQ RKFVNEVRRC DEMERKLRYL  60
   61 EKEIKKDGIP MLDTGESPEA PQPREMIDLE ATFEKLENEL REVNQNAEAL KRNFLELTEL 120
  121 KHILRKTQVF FDEMADNQNE DEQAQLLGEE GVRASQPGQN LKLGFVAGVI LRERLPAFER 180
  181 MLWRACRGNV FLRQAMIETP LEDPTNGDQV HKSVFIIFFQ GDQLKTRVKK ICEGFRATLY 240
  241 PCPEAPADRR EMAMGVMTRI EDLNTVLGQT QDHRHRVLVA AAKNLKNWFV KVRKIKAIYH 300
  301 TLNLFNLDVT QKCLIAECWV PLLDIETIQL ALRRGTERSG SSVPPILNRM QTFENPPTYN 360
  361 RTNKFTKAFQ ALIDAYGVAS YREMNPAPYT IITFPFLFAV MFGDLGHGAI MALFGLWMIR 420
  421 KEKGLAAQKT DNEIWNIFFG GRYIIFLMGV FSMYTGLIYN DIFSKSLNIF GSHWHLSYNK 480
  481 STVMENKFLQ LSPKGDYEGA PYPFGMDPIW QVAGANKIIF HNAYKMKISI IFGVIHMIFG 540
  541 VVMSWHNHTY FRNRISLLYE FIPQLVFLLL LFFYMVLLMF IKWIKFAATN DKPYSEACAP 600
  601 SILITFIDMV LFNTPKPPPE NCETYMFMGQ HFIQVLFVLV AVGCIPVMLL AKPLLIMQAR 660
  661 KQANVQPIAG ATSDAEAGGV SNSGSHGGGG GHEEEEELSE IFIHQSIHTI EYVLGSVSHT 720
  721 ASYLRLWALS LAHAQLAEVL WTMVLSIGLK QEGPVGGIVL TCVFAFWAIL TVGILVLMEG 780
  781 LSAFLHTLRL HWVEFQSKFY KGQGYAFQPF SFDAIIENGA AAAEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..380] PSI-BLAST 29.154902 Heavy meromyosin subfragment
    2 View Details [381..666] deduced N/A No confident structure predictions are available.
    3 View Details [667..825] MSA 2.108949 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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