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Protein Overview: CG8117-PA

General Information:
Name(s) found: CG8117-PA / FBpp0073866 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG8117 (CG8117, FBgn0030663). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:15538255..15539024. It has the cytological map location 13E3. Based on sequence similarity, it is predicted to have molecular function</span>: transcription elongation regulator activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: RNA elongation from RNA polymerase II promoter. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 162 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: transcription [IEA]
    regulation of transcription [IEA]
    RNA elongation from RNA polymerase II promoter [ISS]
    regulation of transcription from RNA polymerase II promoter [IEA]
    Molecular Function: nucleic acid binding [IEA]
    transcription elongation regulator activity [ISS]
    zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMEIRIKCR EMLATALKSG NMPPGCGDPD DMAAKLEDAI YGDLNGCKVK YKNRIRSRLA  60
   61 NLRDPKNPEL RQKFLLGQIT PEELSKMTPE EMASDDMKQM RQKYVQDSIN AAQMAKVQGT 120
  121 KTDQFKCERC DKRNCSQLHI RDGDEPIITF VICDECGNRW KS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] PSI-BLAST 30.0 RNA polymerase II-TFIIS complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle