YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: FBpp0304396, aly-PA

General Information:
Name(s) found: FBpp0304396 [FlyBase]
aly-PA / FBpp0072876 [FlyBase]
Description(s) found:
SHOW ONLY BEST
  • gi|45549265|ref|NP_524857.3| always early [Drosophila melanogaster] [NCBI NR]
  • gi|45445770|gb|AAF47702.3| always early [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=3L:complement(3024592..3025921,3025985..3026260,3026324..3026424); ID=FBpp0304396; name=aly-PB; parent=FBgn0004372,FBtr0332086; dbxref=FlyBase:FBpp0304396,FlyBase_Annotation_IDs:CG2075-PB,REFSEQ:NP_001261348,GB_protein:AGB94043; MD5=aaa4840628d9c51e5beb92d6f146fb44; length=568; release=r5.56; species=Dmel; [FlyBase]
  • The gene always early is referred to in FlyBase by the symbol Dmel\aly (CG2075, FBgn0004372). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:3024129..3026521. It has the cytological map location 63A3. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: male meiosis I; spermatogenesis. 16 alleles are reported. The phenotypes of these alleles are annotated with: testis; spermatocyte. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • (AAF47702) CG2075-PA [DrosMelano7227.FASTAC.txt]
  • CG2075-PA [Drosophila melanogaster]gi|45549265|ref|NP_524857.3| CG2075-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:complement(3024592..3025921,3025985..3026260,3026324..3026424); ID=FBpp0072876; name=aly-PA; parent=FBgn0004372,FBtr0073006; dbxref=GB_protein:AAF47702.2,GB_protein:AAF47702.3,FlyBase:FBpp0072876,FlyBase_Annotation_IDs:CG2075-PA,REFSE [fly-100309-contam.fasta]
  • always early CG2075-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG2075-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:complement(3024592..3025921,3025985..3026260,3026324..3026424); ID=FBpp0072876; name=aly-PA; parent=FBgn0004372,FBtr0073006; dbxref=GB_protein:AAF47702.2,GB_protein:AAF47702.3,FlyBase:FBpp0072876,FlyBase_Annotation_IDs:CG2075-PA,REFSEQ:NP_524857,GB_protein:AAF47702; MD5=aaa4840628d9c51e5beb92d6f146fb44; length=568; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:complement(3024592..3025921,3025985..3026260,3026324..3026424); ID=FBpp0072876; name=aly-PA; parent=FBgn0004372,FBtr0073006; dbxref=GB_protein:AAF47702.2,GB_protein:AAF47702.3,FlyBase:FBpp0072876,FlyBase_Annotation_IDs:CG2075-PA,REFSEQ:NP_524857,GB_protein:AAF47702; MD5=aaa4840628d9c51e5beb92d6f146fb44; length=568; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Always early OS=Drosophila melanogaster GN=aly PE=1 SV=3 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:complement(3024592..3025921,3025985..3026260,3026324..3026424); ID=FBpp0072876; name=aly-PA; parent=FBgn0004372,FBtr0073006; dbxref=GB_protein:AAF47702.2,GB_protein:AAF47702.3,FlyBase:FBpp0072876,FlyBase_Annotation_IDs:CG2075-PA,REFSEQ:NP_524857,GB_protein:AAF47702,FlyMine:FBpp0072876,modMine:FBpp0072876; MD5=aaa4840628d9c51e5beb92d6f146fb44; length=568; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:complement(3024592..3025921,3025985..3026260,3026324..3026424); ID=FBpp0304396; name=aly-PB; parent=FBgn0004372,FBtr0332086; dbxref=FlyBase:FBpp0304396,FlyBase_Annotation_IDs:CG2075-PB; MD5=aaa4840628d9c51e5beb92d6f146fb44; length=568; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • Always early OS=Drosophila melanogaster GN=aly PE=2 SV=3 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3L:complement(join(3026324..3026424,3025985..3026260,3024592..3025921)); ID=FBpp0072876; name=aly-PA; parent=FBgn0004372,FBtr0073006; dbxref=GB_protein:AAF47702.2,GB_protein:AAF47702.3,FlyBase:FBpp0072876,FlyBase_Annotation_IDs:CG2075-PA,REFSEQ:NP_524857,GB_protein:AAF47702,FlyMine:FBpp0072876,modMine:FBpp0072876; MD5=aaa4840628d9c51e5beb92d6f146fb44; length=568; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(join(3026324..3026424,3025985..3026260,3024592..3025921)); ID=FBpp0304396; name=aly-PB; parent=FBgn0004372,FBtr0332086; dbxref=FlyBase:FBpp0304396,FlyBase_Annotation_IDs:CG2075-PB,REFSEQ:NP_001261348,GB_protein:AGB94043; MD5=aaa4840628d9c51e5beb92d6f146fb44; length=568; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(join(3026324..3026424,3025985..3026260,3024592..3025921)); ID=FBpp0072876; name=aly-PA; parent=FBgn0004372,FBtr0073006; dbxref=GB_protein:AAF47702.2,GB_protein:AAF47702.3,FlyBase:FBpp0072876,FlyBase_Annotation_IDs:CG2075-PA,REFSEQ:NP_524857,GB_protein:AAF47702,FlyMine:FBpp0072876,modMine:FBpp0072876; MD5=aaa4840628d9c51e5beb92d6f146fb44; length=568; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3L:complement(join(3026324..3026424,3025985..3026260,3024592..3025921)); ID=FBpp0304396; name=aly-PB; parent=FBgn0004372,FBtr0332086; dbxref=FlyBase:FBpp0304396,FlyBase_Annotation_IDs:CG2075-PB,REFSEQ:NP_001261348,GB_protein:AGB94043; MD5=aaa4840628d9c51e5beb92d6f146fb44; length=568; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Always early, isoform A OS=Drosophila melanogaster GN=aly PE=4 SV=3 [DROME.fasta.20160308]
  • FBpp0072876 type=protein; loc=3L:complement(join(3026324..3026424,3025985..3026260,3024592..3025921)); ID=FBpp0072876; name=aly-PA; parent=FBgn0004372,FBtr0073006; dbxref=GB_protein:AAF47702.2,GB_protein:AAF47702.3,FlyBase:FBpp0072876,FlyBase_Annotation_IDs:CG2075-PA,REFSEQ:NP_524857,GB_protein:AAF47702,FlyMine:FBpp0072876,modMine:FBpp0072876; MD5=aaa4840628d9c51e5beb92d6f146fb44; length=568; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0304396 type=protein; loc=3L:complement(join(3026324..3026424,3025985..3026260,3024592..3025921)); ID=FBpp0304396; name=aly-PB; parent=FBgn0004372,FBtr0332086; dbxref=FlyBase:FBpp0304396,FlyBase_Annotation_IDs:CG2075-PB,REFSEQ:NP_001261348,GB_protein:AGB94043; MD5=aaa4840628d9c51e5beb92d6f146fb44; length=568; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:complement(join(3026324..3026424,3025985..3026260,3024592..3025921)); ID=FBpp0072876; name=aly-PA; parent=FBgn0004372,FBtr0073006; dbxref=GB_protein:AAF47702.2,GB_protein:AAF47702.3,FlyBase:FBpp0072876,FlyBase_Annotation_IDs:CG2075-PA,REFSEQ:NP_524857,GB_protein:AAF47702,UniProt/TrEMBL:Q9VZW3,FlyMine:FBpp0072876,modMine:FBpp0072876; MD5=aaa4840628d9c51e5beb92d6f146fb44; length=568; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3L:complement(join(3026324..3026424,3025985..3026260,3024592..3025921)); ID=FBpp0304396; name=aly-PB; parent=FBgn0004372,FBtr0332086; dbxref=FlyBase:FBpp0304396,FlyBase_Annotation_IDs:CG2075-PB,REFSEQ:NP_001261348,GB_protein:AGB94043,UniProt/TrEMBL:Q9VZW3; MD5=aaa4840628d9c51e5beb92d6f146fb44; length=568; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 568 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][ISS]
    nuclear chromatin [IDA]
    cytoplasm [IDA]
    chromatin [IDA]
    Biological Process: spermatid development [TAS]
    spermatogenesis [IEP][IMP][NAS]
    male meiosis I [IMP]
    transcription initiation [TAS]
    chromatin organization [NAS]
    meiosis [TAS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVDPLSIDN FTIQSEICEE NEFLANIGLL STTTMSRHQL KKPRKMVAAW QNDELFIKRP  60
   61 NFAPRIRISE KPEIQGRIKP GVASKRTENF TKKPSNISVD VSEDEKAKEK EKEQDPYSND 120
  121 FILGKRLYNF LKYLSSHRWI WCEFVDSFLD KPTLTMGYDM KRFIAEYCPL LHSCFMPRRG 180
  181 WQLVRRNMGK ARRFSAAFIE LEREELECQR RIVRQLQQHK FNPKENVGYL DQIPKRVPLP 240
  241 LAKDATVSSF LHGNSFEGIV NGTVMGYDPQ DYTYLVRFNR NDNAVVLSLP DSQLYSDEET 300
  301 AAVPLSIIMR GNKSSSVISE SAKTEKFGNK RYTKELLESV LRVGKLQDVK HKILMDLARM 360
  361 NEDFETFKEI GSSSSRRDAK VTPQRENLQR RYSASMITLH RVNADILEPL RILHDYLVEY 420
  421 QKQDEEEESK RGRPASEVYQ KCRMQAEQDL KTAADEKFLK IESDRTQEFV RNLHTILYLN 480
  481 GKLGRENSSN LETIIADLVT HMVDNIQPSL GRKLKDGVDS LEPLRQQVVQ IFKDVKKPER 540
  541 FQITQQAPMQ TEDGIYNFVV EAQPDTPS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle