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Protein Overview: FBpp0301193, AP-...

General Information:
Name(s) found: FBpp0305942 [FlyBase]
FBpp0301193 [FlyBase]
AP-1gamma-PF / FBpp0111878 [FlyBase]
AP-1gamma-PE / FBpp0089134 [FlyBase]
AP-1gamma-PA / FBpp0071231 [FlyBase]
Description(s) found:
Found 49 descriptions.
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  • type=protein; loc=X:join(9005022..9005038,9005115..9005176,9005420..9005561,9005631..9005819,9005887..9006125,9006196..9006272,9007676..9007932,9008008..9008603,9008667..9008805,9008871..9009159,9009229..9009744,9009798..9009941,9010004..9010111,9010179..9010295); ID=FBpp0305942; name=AP-1gamma-PI; parent=FBgn0030089,FBtr0333808; dbxref=REFSEQ:NP_001259371,GB_protein:AGB95214,FlyBase:FBpp0305942,FlyBase_Annotation_IDs:CG9113-PI; MD5=88311cd777b6d7635aa5402402fa6689; length=963; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=X:join(9005022..9005038,9005115..9005176,9005420..9005561,9005631..9005819,9005887..9006125,9006196..9006272,9007676..9007932,9008008..9008603,9008667..9008805,9008871..9009159,9009229..9009744,9009798..9009941,9010004..9010111,9010179..9010295); ID=FBpp0301193; name=AP-1gamma-PG; parent=FBgn0030089,FBtr0309254; dbxref=FlyBase:FBpp0301193,FlyBase_Annotation_IDs:CG9113-PG,REFSEQ:NP_001245589,GB_protein:AFH07303; MD5=88311cd777b6d7635aa5402402fa6689; length=963; release=r5.56; species=Dmel; [FlyBase]
  • The gene AP-1Ã?&#142;Ã?³ is referred to in FlyBase by the symbol Dmel\AP-1Ã?&#142;Ã?³ (CG9113, FBgn0030089). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:9002726..9011773. It has the cytological map location 8C9-8C10. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding; protein transporter activity. It is reported to be involved in the biological process</span>: vesicle coating; neurotransmitter secretion; synaptic vesicle coating. 3 alleles are reported. No phenotypic data is available. It has 6 annotated transcripts and 6 annotated polypeptides. [FlyBase]
  • The gene AP-1Ã?&#142;Ã?³ is referred to in FlyBase by the symbol Dmel\AP-1Ã?&#142;Ã?³ (CG9113, FBgn0030089). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:9002726..9011773. It has the cytological map location 8C9-8C10. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding; protein transporter activity. It is reported to be involved in the biological process</span>: vesicle coating; neurotransmitter secretion; synaptic vesicle coating. 3 alleles are reported. No phenotypic data is available. It has 6 annotated transcripts and 6 annotated polypeptides. [FlyBase]
  • The gene AP-1Ã?&#142;Ã?³ is referred to in FlyBase by the symbol Dmel\AP-1Ã?&#142;Ã?³ (CG9113, FBgn0030089). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:9002726..9011773. It has the cytological map location 8C9-8C10. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding; protein transporter activity. It is reported to be involved in the biological process</span>: vesicle coating; neurotransmitter secretion; synaptic vesicle coating. 3 alleles are reported. No phenotypic data is available. It has 6 annotated transcripts and 6 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 963 amino acids

    Gene Ontology:
    Cellular Component: synaptic vesicle [TAS]
    clathrin adaptor complex [IEA]
    Golgi apparatus part [IEA]
    coated vesicle [TAS]
    Biological Process: vesicle coating [TAS]
    vesicle-mediated transport [IEA]
    synaptic vesicle coating [TAS]
    intracellular protein transport [IEA]
    neurotransmitter secretion [NAS]
    Molecular Function: protein binding [IEA]
    protein transporter activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSEHGFNPA FNMATIRQAF TEAVERVRMP TPTRLRDLIR QIRAARTAAE ERAVVNKECA  60
   61 YIRSTFREED SVWRCRNIAK LLYIHMLGYP AHFGQLECLK LTASTRFTDK RIGYLGAMLL 120
  121 LDERQDVHLL ITNCLKNDLN SSTQFVVGLA LCTLGAIASP EMARDLASEV ERLMKSPNTY 180
  181 IRKKATLCAF RVIRRVPELM EIFLPATRSL LSEKNHGILI TGVTLITEMC ENSSDTLMHF 240
  241 KKIVPNLVRI LKNLILGGYS PEHDVSGVSD PFLQVKILRL LRILGHNDPD ASEAMNDILA 300
  301 QVATNTETSK NVGNTILYET VLSIMDIRSE GGLRVLAVNI LGRFLLNSDK NIRYVALNTL 360
  361 LRTVHADTSA VQRHRTTILE CLKDPDVSIR RRAMELSFAL INAQNIRTMT KELLLFLEKA 420
  421 DAEFKAQCSS GMILAAERYS PTTRWHLDTQ LSVLIAAGNY VRDDVVSSTI QLVSSSPVPE 480
  481 QTYITNRFWE SLQVANHCED KQPLLQVAVW AIGEYGDLFM YGANEDEFER PTESDLIAVY 540
  541 YKFLTSAQVS TTSKQYALVS LAKLSTRLQQ CVEEIQALIT SFGSHLNVDL QQRGVEFTQL 600
  601 FGHYKHLRPP LLEKMPAMQI SRISSQNGES GGGSFDDNSP DVIENGVEGG GGGGHSLIES 660
  661 NMNTLGDNTN ILLDLLGSTD LSAGGAGDLV AATDLSNAVH KKNSRNANDV VAPVSNNQDL 720
  721 LDLLDLDLSA PSSTTTGAPA GGGGGGGIVA LVGDNNQSSA ANMNNMLGGL DLGGFGSGLD 780
  781 SSASIPTNGN DLASMLGGLG APPAASPSLA ASAPVGNLID GHAGSLLADL NPTAASNNVV 840
  841 VPPQGPRLTA LDKDGLLVQL VSVRGSDCMR IYMTTTNNSD NTLDQYLLQA AVQRSFQLQM 900
  901 LTPSGSVLPP GGVITQEMRV VATSNATLRM RLRIQYVLDG QQQVEQTEVS GFPEQQPAPA 960
  961 AAE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..675] PSI-BLAST 150.0 AP1 clathrin adaptor core
    2 View Details [676..774] deduced N/A No confident structure predictions are available.
    3 View Details [775..963] PSI-BLAST 17.221849 Gamma1-adaptin domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  1.73706375360191 bayes_pls_golite062009
  • protein binding
    		•  1.07977592306595 bayes_pls_golite062009
  • transporter activity
    		•  0.169557557237959 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle