| Protein: | FBpp0301193, AP-... |
| Organism: | Drosophila melanogaster |
| Length: | 963 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0301193, AP-....
| Description | E-value | Query Range |
Subject Range |
|
|
620.0 | [0..2] | [963..15] |
|
Region A: Residues: [1-675] |
1 11 21 31 41 51
| | | | | |
1 MNSEHGFNPA FNMATIRQAF TEAVERVRMP TPTRLRDLIR QIRAARTAAE ERAVVNKECA 60
61 YIRSTFREED SVWRCRNIAK LLYIHMLGYP AHFGQLECLK LTASTRFTDK RIGYLGAMLL 120
121 LDERQDVHLL ITNCLKNDLN SSTQFVVGLA LCTLGAIASP EMARDLASEV ERLMKSPNTY 180
181 IRKKATLCAF RVIRRVPELM EIFLPATRSL LSEKNHGILI TGVTLITEMC ENSSDTLMHF 240
241 KKIVPNLVRI LKNLILGGYS PEHDVSGVSD PFLQVKILRL LRILGHNDPD ASEAMNDILA 300
301 QVATNTETSK NVGNTILYET VLSIMDIRSE GGLRVLAVNI LGRFLLNSDK NIRYVALNTL 360
361 LRTVHADTSA VQRHRTTILE CLKDPDVSIR RRAMELSFAL INAQNIRTMT KELLLFLEKA 420
421 DAEFKAQCSS GMILAAERYS PTTRWHLDTQ LSVLIAAGNY VRDDVVSSTI QLVSSSPVPE 480
481 QTYITNRFWE SLQVANHCED KQPLLQVAVW AIGEYGDLFM YGANEDEFER PTESDLIAVY 540
541 YKFLTSAQVS TTSKQYALVS LAKLSTRLQQ CVEEIQALIT SFGSHLNVDL QQRGVEFTQL 600
601 FGHYKHLRPP LLEKMPAMQI SRISSQNGES GGGSFDDNSP DVIENGVEGG GGGGHSLIES 660
661 NMNTLGDNTN ILLDL
|
| Detection Method: |  |
| Confidence: | 150.0 |
| Match: | 1w63A |
| Description: | AP1 clathrin adaptor core |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [676-774] |
1 11 21 31 41 51
| | | | | |
1 LGSTDLSAGG AGDLVAATDL SNAVHKKNSR NANDVVAPVS NNQDLLDLLD LDLSAPSSTT 60
61 TGAPAGGGGG GGIVALVGDN NQSSAANMNN MLGGLDLGG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [775-963] |
1 11 21 31 41 51
| | | | | |
1 FGSGLDSSAS IPTNGNDLAS MLGGLGAPPA ASPSLAASAP VGNLIDGHAG SLLADLNPTA 60
61 ASNNVVVPPQ GPRLTALDKD GLLVQLVSVR GSDCMRIYMT TTNNSDNTLD QYLLQAAVQR 120
121 SFQLQMLTPS GSVLPPGGVI TQEMRVVATS NATLRMRLRI QYVLDGQQQV EQTEVSGFPE 180
181 QQPAPAAAE
|
| Detection Method: | |
| Confidence: | 17.221849 |
| Match: | 1iu1A |
| Description: | Gamma1-adaptin domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.73706375360191 | bayes_pls_golite062009 |
| protein binding | 1.07977592306595 | bayes_pls_golite062009 |
| transporter activity | 0.169557557237959 | bayes_pls_golite062009 |
