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Protein Overview: SYN1L_MOUSE

General Information:
Name(s) found: SYN1L_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|85362733|ref|NP_001028506.1| capucin [Mus musculus] [NCBI NR]
  • gi|74148640|dbj|BAE24274.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|66062505|gb|AAY42816.1| capucin [Mus musculus] [NCBI NR]
  • gi|66062489|gb|AAY42815.1| capucin [Mus musculus] [NCBI NR]
  • gi|187953937|gb|AAI38502.1| Transmembrane protein 90a [Mus musculus] [NCBI NR]
  • gi|148670873|gb|EDL02820.1| mCG5511, isoform CRA_a [Mus musculus] [NCBI NR]
  • gi|148670872|gb|EDL02819.1| mCG5511, isoform CRA_a [Mus musculus] [NCBI NR]
  • gi|148670871|gb|EDL02818.1| mCG5511, isoform CRA_a [Mus musculus] [NCBI NR]
  • gi|124297659|gb|AAI32222.1| Transmembrane protein 90a [Mus musculus] [NCBI NR]
  • gi|123797459|sp|Q3USQ7.1|TM90A_MOUSE RecName: Full=Capucin; AltName: Full=Caudate and putamen-enriched protein; AltName: Full=Transmembrane protein 90A [NCBI NR]
  • Capucin OS=Mus musculus GN=Tmem90a PE=2 SV=1 [Swiss-Prot]
  • Synapse differentiation-inducing gene protein 1-like OS=Mus musculus GN=Syndig1l PE=2 SV=1 [Swiss-Prot]
  • similar to chromosome 20 open reading frame 39 [HMR_022704.fasta]
  • Tax_Id=10090 Adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230339N19 product:hypothetical protein, full insert sequence [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • PREDICTED: hypothetical protein XP_906220 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • PREDICTED: hypothetical protein XP_891852 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • capucin [Mus musculus] [NCBI-RefSeq_mouse_na_03-19-2007_reversed.fasta]
  • Capucin (Caudate and putamen-enriched protein) (Transmembrane protein 90A) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Transmembrane protein 90a [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • mCG5511, isoform CRA_a [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Tmem90a Capucin [mouse-ipi-250309-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Tmem90a Adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230339N19 product:hypothetical protein, full insert sequence [zeeyong.fasta]
  • Tax_Id=10090 Gene_Symbol=Tmem90a capucin ENSMUSG00000071234 IPI00339835 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • IPI:IPI00339835.4|SWISS-PROT:Q3USQ7|TREMBL:B2RRM8|ENSEMBL:ENSMUSP00000093206|REFSEQ:NP_001028506 Tax_Id=10090 Gene_Symbol=Tmem90a Capucin [ipi.MOUSE.fasta.20090209]
  • Capucin OS=Mus musculus GN=Tmem90a [011711_HMR.fasta]
  • Tax_Id=10090 Gene_Symbol=Tmem90a Synapse differentiation-inducing gene protein 1-like [EBI_IPI_mouse_V3_87_09-27-2011_reversed.fasta]
  • sp|Q3USQ7|SYN1L_MOUSE Synapse differentiation-inducing gene protein 1-like OS=Mus musculus GN=Syndig1l PE=2 SV=1 [uniprot.sptr.mouse.20130102]
  • tr|B2RRM8|B2RRM8_MOUSE MCG5511, isoform CRA_a OS=Mus musculus GN=Tmem90a PE=2 SV=1 [uniprot.sptr.mouse.20130102]
  • MCG5511, isoform CRA_a OS=Mus musculus GN=Tmem90a PE=2 SV=1 [mouse-uniprot-290313-contam.fasta]
  • MCG5511, isoform CRA_a OS=Mus musculus GN=Syndig1l PE=2 SV=1 [mouse-uniprot-oct2014-contam.fasta]
  • Isoform of Q3USQ7, MCG5511, isoform CRA_a OS=Mus musculus GN=Syndig1l PE=2 SV=1 [MOUSE.fasta.20160308]
    • Organism: Mus musculus
    Length: 237 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    integral to membrane [IEA]
    Golgi apparatus [IDA]
    Biological Process: response to biotic stimulus [IEA]
    biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLSELQNP LLPRSPTHLH RPYPYPEAPP GWSCQEQLYS FLLGGAGPAR AHQLLDPGSL  60
   61 QLAVEAWYRP SCLLGRDKVK EPKAGSCETS FTEAREPLAG PAEEGSEPGQ AAEDVTIHTV 120
  121 SYGVQEELQG QEDSQEEESD GTSSESECED AFLTLPPRDH LGLTLFSMLC CFWPLGIAAF 180
  181 YFSQGTSKAI SKGDFRLAST TSRRALFLAT LSIAVGAGLY VAVVVALAAY MSQNGHG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle