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Protein Overview: YNBC_ECOLI

General Information:
Name(s) found: YNBC_ECOLI [Swiss-Prot]
Description(s) found:
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  • gi|9911032|sp|P76092.1|YNBC_ECOLI RecName: Full=Uncharacterized protein ynbC [NCBI NR]
  • pir||E64892 probable membrane protein b1410 - Escherichia coli (strain K-12) [NCBI NR]
  • gi|3041757|dbj|BAA25406.1| unnamed protein product [Escherichia coli] [NCBI NR]
  • Hypothetical protein ynbC - Escherichia coli [Swiss-Prot]
  • hypothetical protein; putative methylase [Escherichia coli K12]gi|1787678|gb|AAC74492.1| orf, hypothetical protein; putative methylase [Escherichia coli K12]gi|7466757|pir||E64892 probable membrane protein b1410 - Escherichia coli (strain K-12)gi|99110 [nrdb_11152004_Chlamydomonas]
  • Uncharacterized protein ynbC [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • unnamed protein product [Escherichia coli] [nr-271106-contam.fasta]
  • Uncharacterized protein ynbC OS=Escherichia coli (strain K12) GN=ynbC PE=1 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
  • Uncharacterized protein YnbC OS=Escherichia coli (strain K12) GN=ynbC PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Escherichia coli
    Length: 585 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENSRIPGEH FFTTSDNTAL FYRHWPALQP GAKKVIVLFH RGHEHSGRLQ HLVDELAMPD  60
   61 TAFYAWDARG HGKSSGPRGY SPSLARSVRD VDEFVRFAAS DSQVGLEEVV VIAQSVGAVL 120
  121 VATWIHDYAP AIRGLVLASP AFKVKLYVPL ARPALALWHR LRGLFFINSY VKGRYLTHDR 180
  181 QRGASFNNDP LITRAIAVNI LLDLYKTSER IIRDAAAITL PTQLLISGDD YVVHRQPQID 240
  241 FYQRLRSPLK ELHLLPGFYH DTLGEENRAL AFEKMQSFIS RLYANKSQKF DYQHEDCTGP 300
  301 SADRWRLLSG GPVPLSPVDL AYRFMRKAMK LFGTHSSGLH LGMSTGFDSG SSLDYVYQNQ 360
  361 PQGSNAFGRL VDKIYLNSVG WRGIRQRKTH LQILIKQAVA DLHAKGLAVR VVDIAAGHGR 420
  421 YVLDALANEP AVSDILLRDY SELNVAQGQE MIAQRGMSGR VRFEQGDAFN PEELSALTPR 480
  481 PTLAIVSGLY ELFPENEQVK NSLAGLANAI EPGGILIYTG QPWHPQLEMI AGVLTSHKDG 540
  541 KPWVMRVRSQ GEMDSLVRDA GFDKCTQRID EWGIFTVSMA VRRDN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..286] PSI-BLAST 38.522879 CHLOROPEROXIDASE F/PROPIONATE COMPLEX
    2 View Details [287..519] PSI-BLAST 14.154902 The crystal structure of E. coli Fmu binary complex with S-Adenosylmethionine at 2.1 A resolution
    3 View Details [520..585] PSI-BLAST 13.09691 Crystal Structure of Human methyltransferase AD-003 in complex with S-adenosyl-L-homocysteine

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • hydrolase activity
    		•  0.716449555827534 bayes_pls_golite062009
  • lipase activity
    		•  0.602417432627875 bayes_pls_golite062009
  • carboxylesterase activity
    		•  0.535924720022784 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.100880080935406 bayes_pls_golite062009
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.25333584501255 bayes_pls_golite062009
  • transferase activity
    		•  0.999964866871553 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.644010137949015 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.635463629299812 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  0.181420092548185 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle