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Protein Overview: YJHI_ECOLI

General Information:
Name(s) found: YJHI_ECOLI [Swiss-Prot]
Description(s) found:
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  • gi|732067|sp|P39360.1|YJHI_ECOLI RecName: Full=Uncharacterized HTH-type transcriptional regulator yjhI [NCBI NR]
  • gi|537140|gb|AAA97195.1| ORF_f262a [Escherichia coli] [NCBI NR]
  • pir||S56524 probable transcription regulator (fecI-fimB intergenic region) - Escherichia coli (strain K-12) [NCBI NR]
  • Putative HTH-type transcriptional regulator yjhI - Escherichia coli [Swiss-Prot]
  • KpLE2 phage-like element; putative transcriptional repressor (IclR family); putative regulator [Escherichia coli K12]gi|1790752|gb|AAC77255.1| putative regulator; KpLE2 phage-like element; putative transcriptional repressor (IclR family) [Escherichia col [nrdb_11152004_Chlamydomonas]
  • Uncharacterized HTH-type transcriptional regulator yjhI [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • ORF_f262a [Escherichia coli] [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • Uncharacterized HTH-type transcriptional regulator yjhI OS=Escherichia coli (strain K12) GN=yjhI PE=4 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
  • Uncharacterized HTH-type transcriptional regulator YjhI OS=Escherichia coli (strain K12) GN=yjhI PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Escherichia coli
    Length: 262 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRKGCNSLV RAEKILTHIA WVGMASYMEL LNKFQYPKSS LLNLLNVMVD CGFLIKNKNG  60
   61 YYSLGIKNYE LGCQALHRQN IFEVTKRPMQ ELSLKSGLVC HLGAMESISA IYLDKIESPD 120
  121 SVPTSKSWIG KKLELHITAL GKALLAWKTR EELDYFLEAL TLTPHTRNTF TDKKLFLEEL 180
  181 QKTRLRGWAI DNEESTYGAV CLSMPVFNMY NRVNYAISLS GDPVVYSGNK IDSYLELLRK 240
  241 CAEQISYGLG YRNENEHLRK GN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..262] PSI-BLAST 60.69897 Thanscriptional regulator IclR, N-terminal domain; Thanscriptional regulator IclR, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  2.80545151006505 bayes_pls_golite062009
  • DNA binding
    		•  2.12853183689157 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.06466906422115 bayes_pls_golite062009
  • transcription factor activity
    		•  2.00805912336419 bayes_pls_golite062009
  • binding
    		•  1.3234252548847 bayes_pls_golite062009
  • transcription activator activity
    		•  0.53294679084865 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.53285802828572 bayes_pls_golite062009
  • catalytic activity
    		•  0.319188290441009 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.76

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle