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Protein Overview: YAGF_ECOLI

General Information:
Name(s) found: YAGF_ECOLI [Swiss-Prot]
Description(s) found:
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  • pir||E64752 probable dihydroxy-acid dehydratase yagF - Escherichia coli (strain K-12) [NCBI NR]
  • gi|2497350|sp|P77596.1|YAGF_ECOLI RecName: Full=Uncharacterized protein yagF [NCBI NR]
  • gi|1552838|gb|AAB08690.1| similar to E. coli YjhG [Escherichia coli] [NCBI NR]
  • Hypothetical protein yagF - Escherichia coli [Swiss-Prot]
  • CP4-6 prophage; putative dehydratase; putative dehydratase [Escherichia coli K12]gi|1786464|gb|AAC73372.1| putative dehydratase; CP4-6 prophage; putative dehydratase [Escherichia coli K12]gi|1552838|gb|AAB08690.1| similar to E. coli YjhG [Escherichia co [nrdb_11152004_Chlamydomonas]
  • Uncharacterized protein yagF [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • similar to E. coli YjhG [Escherichia coli] [nr-271106-contam.fasta]
  • Uncharacterized protein yagF OS=Escherichia coli (strain K12) GN=yagF PE=3 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
  • Uncharacterized protein YagF OS=Escherichia coli (strain K12) GN=yagF PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Escherichia coli
    Length: 655 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIEKIFTPQ DDAFYAVITH AAGPQGALPL TPQMLMESPS GNLFGMTQNA GMGWDANKLT  60
   61 GKEVLIIGTQ GGIRAGDGRP IALGYHTGHW EIGMQMQAAA KEITRNGGIP FAAFVSDPCD 120
  121 GRSQGTHGMF DSLPYRNDAA IVFRRLIRSL PTRRAVIGVA TCDKGLPATM IALAAMHDLP 180
  181 TILVPGGATL PPTVGEDAGK VQTIGARFAN HELSLQEAAE LGCRACASPG GGCQFLGTAG 240
  241 TSQVVAEALG LALPHSALAP SGQAVWLEIA RQSARAVSEL DSRGITTRDI LSDKAIENAM 300
  301 VIHAAFGGST NLLLHIPAIA HAAGCTIPDV EHWTRINRKV PRLVSVLPNG PDYHPTVRAF 360
  361 LAGGVPEVML HLRDLGLLHL DAMTVTGQTV GENLEWWQAS ERRARFRQCL REQDGVEPDD 420
  421 VILPPEKAKA KGLTSTVCFP TGNIAPEGSV IKATAIDPSV VGEDGVYHHT GRVRVFVSEA 480
  481 QAIKAIKREE IVQGDIMVVI GGGPSGTGME ETYQLTSALK HISWGKTVSL ITDARFSGVS 540
  541 TGACFGHVSP EALAGGPIGK LRDNDIIEIA VDRLTLTGSV NFIGTADNPL TPEEGARELA 600
  601 RRQTHPDLHA HDFLPDDTRL WAALQSVSGG TWKGCIYDTD KIIEVINAGK KALGI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..655] PSI-BLAST 163.0 No description for 2gp4A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphogluconate dehydratase activity
    		•  6.35859617166212 bayes_pls_golite062009
  • 3-isopropylmalate dehydratase activity
    		•  4.12520779605632 bayes_pls_golite062009
  • catalytic activity
    		•  1.99003321006923 bayes_pls_golite062009
  • dihydroxy-acid dehydratase activity
    		•  1.86041876362237 bayes_pls_golite062009
  • lyase activity
    		•  1.77649447753579 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  1.77249348870989 bayes_pls_golite062009
  • hydro-lyase activity
    		•  1.68972070574507 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle