Protein Overview: T2AG_MOUSE

General Information:
Name(s) found:	T2AG_MOUSE [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|87299617\|ref\|NP_001034608.1\| general transcription factor II A, 2 [Mus musculus] [NCBI NR] gi\|74193485\|dbj\|BAE20680.1\| unnamed protein product [Mus musculus] [NCBI NR] gi\|74146762\|dbj\|BAE41360.1\| unnamed protein product [Mus musculus] [NCBI NR] gi\|47117190\|sp\|Q80ZM7.2\|T2AG_MOUSE RecName: Full=Transcription initiation factor IIA subunit 2; AltName: Full=General transcription factor IIA subunit 2; AltName: Full=Transcription initiation factor IIA gamma chain; Short=TFIIA-gamma [NCBI NR] gi\|148694240\|gb\|EDL26187.1\| mCG2938, isoform CRA_a [Mus musculus] [NCBI NR] gi\|148694236\|gb\|EDL26183.1\| mCG2938, isoform CRA_a [Mus musculus] [NCBI NR] gi\|148694233\|gb\|EDL26180.1\| mCG2938, isoform CRA_a [Mus musculus] [NCBI NR] Transcription initiation factor IIA subunit 2 OS=Mus musculus GN=Gtf2a2 PE=1 SV=2 [Swiss-Prot] Putative transcription initiation factor IIA gamma chain [ipi.MOUSE.v3.06.fasta] general transcription factor IIa, 2 (12kD subunit) [Rattus norvegicus]gi\|2149998\|gb\|AAB58717.1\| TFIIA small subunit [Rattus norvegicus]gi\|2811071\|sp\|O08950\|T2AG_RAT Transcription initiation factor IIA gamma chain (TFIIA P12 subunit) (TFIIA-12) (TFIIAS) [nrdb_11152004_Chlamydomonas] Tax_Id=10090 Putative transcription initiation factor IIA gamma chain [EBI-IPI_mouse_3.06_05-10-2005_origrev_con.fasta] general transcription factor II A, 2 [Mus musculus] [NCBI-RefSeq_mouse_na_03-19-2007_reversed.fasta] Transcription initiation factor IIA subunit 2 (General transcription factor IIA subunit 2) (Transcription initiation factor IIA gamma chain) (TFIIA-gamma) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] mCG2938, isoform CRA_a [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10090 PUTATIVE TRANSCRIPTION INITIATION FACTOR IIA GAMMA CHAIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Putative transcription initiation factor IIA gamma chain (TFIIA P12 subunit) (TFIIA-12) (TFIIAS) (TFIIA-gamma) [nr-271106-contam.fasta] transcription initiation factor IIA subunit 2 [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta] Transcription initiation factor IIA subunit 2 OS=Mus musculus GN=Gtf2a2 PE=2 SV=2 [UniProt_mouse_sprotvarsplic_11-08-2010_reversed.fasta] Transcription initiation factor IIA subunit 2 OS=Mus musculus GN=Gtf2a2 [122011_mus.fasta] Tax_Id=10090 Gene_Symbol=Gtf2a2 Transcription initiation factor IIA subunit 2 [EBI-IPI_mouse_2_08-18-2011_reversed.fasta] sp\|Q80ZM7\|T2AG_MOUSE Transcription initiation factor IIA subunit 2 OS=Mus musculus GN=Gtf2a2 PE=2 SV=2 [uniprot.sptr.mouse.20130102] tr\|Q3TE88\|Q3TE88_MOUSE Transcription initiation factor IIA subunit 2 OS=Mus musculus GN=Gtf2a2 PE=2 SV=1 [uniprot.sptr.mouse.20130102] Transcription initiation factor IIA subunit 2 OS=Mus musculus GN=Gtf2a2 PE=3 SV=1 [mouse-uniprot-290313-contam.fasta] MCG2938, isoform CRA_a OS=Mus musculus GN=Gtf2a2 PE=2 SV=1 [UniProt_mouse_01-27-2011_reversed.fasta] Transcription initiation factor IIA subunit 2 OS=Mus musculus GN=Gtf2a2 PE=2 SV=1 [mouse-uniprot-oct2014-contam.fasta] Isoform of Q80ZM7, Transcription initiation factor IIA subunit 2 OS=Mus musculus GN=Gtf2a2 PE=1 SV=1 [MOUSE.fasta.20160308]
Organism:	Mus musculus
Length:	109 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:
Sequence: [PDR BLAST] [ProtParam]	1 11 21 31 41 51 \| \| \| \| \| \| 1 MAYQLYRNTT LGNSLQESLD ELIQSQQITP QLALQVLLQF DKAINSALAQ RVRNRVNFRG 60 61 SLNTYRFCDN VWTFVLNDVE FREVTELIKV DKVKIVACDG KNTGSNTTE

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..109]	PSI-BLAST	46.221849	HUMAN TFIIA/TBP/DNA COMPLEX

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
general RNA polymerase II transcription factor activity	10.9702263885595	bayes_pls_golite062009
RNA polymerase II transcription factor activity	5.06993130505706	bayes_pls_golite062009
transcription regulator activity	4.7915315980149	bayes_pls_golite062009
transcription activator activity	2.75298328621175	bayes_pls_golite062009
nucleic acid binding	2.26583234267697	bayes_pls_golite062009
DNA binding	2.12151270115091	bayes_pls_golite062009
transcription coactivator activity	2.10703866415858	bayes_pls_golite062009
binding	1.9212205923594	bayes_pls_golite062009
protein binding	1.54756881357956	bayes_pls_golite062009
transcription factor binding	1.31659763916181	bayes_pls_golite062009
transcription cofactor activity	1.15899255380593	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle