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Protein Overview: SYFB_SALTI

General Information:
Name(s) found: SYFB_SALTI [Swiss-Prot]
Description(s) found:
Found 4 descriptions.
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  • Phenylalanyl-tRNA synthetase beta chain OS=Salmonella typhi GN=pheT PE=3 SV=1 [Swiss-Prot]
    • Organism: Salmonella typhi
    Length: 795 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSELWLRE WVNPAIDSDA LANQITMAGL EVDGVEPVAG SFNGVVVGEV VECAQHPNAD  60
   61 KLRVTKVNVG GERLLDIVCG APNCRQGLKV AVATIGAILP GDFKIKAAKL RGEPSEGMLC 120
  121 SFSELGISDD HSGIIELPAD APLGTDIREY LKLDDNTIEI SVTPNRADCL GIIGVARDVA 180
  181 VLNKAPLQEP EMAPVTATIS DTLLITVEAV DACPRYLGRV VKGINVNAPT PLWMKEKLRR 240
  241 CGIRSIDAVV DVTNYVLLEL GQPMHAFDKD RIDGGIVVRM AKEGETVVLL DGSEATLNAD 300
  301 TLVIADHHKA LGIAGIFGGE HSGVNGETQN VLLECAYFNP LSITGRARRH GLHTDASHRY 360
  361 ERGVDPALQY KTIERATRLL LDICGGDAGP IIDVSNEATL PKRATITLRR SKLDRLIGHH 420
  421 IADEQVSDIL RRLGCEVTEG QDEWKAVAPT WRFDMEIEED LVEEVARVYG YNNIPDEPIQ 480
  481 AGLIMGTHRE ADLSLKRVKT MLNDKGYQEV ITYSFVDPKV QQLIHPGAEA LLLPNPISVE 540
  541 MSAMRLSLWS GLLATVVYNQ NRQQNRVRIF ETGLRFVPDT QANLGIRQDL MLAGVICGNR 600
  601 YDEHWNLAKE TVDFYDLKGD LEAVLDLTGK LGDIQFKAEM NPALHPGQSA AIYLKDERIG 660
  661 FIGVVHPELE RKLDLNGRTL VFELEWNKLA DRIVPQAREI SRFPANRRDI AVVVAENVPA 720
  721 ADILSECKKV GVNQVVGVNL FDVYRGKGVA EGYKSLAISL ILQDTNRTLE EEEIAATVAK 780
  781 CVEALKERFQ ASLRD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..795] PSI-BLAST 1000.0 Domains B1 and B5 of PheRS-beta, PheT; Domain B2 of PheRS-beta, PheT; Phenylalanyl-tRNA synthetase; Phenyl-tRNA synthetase (PheRS) beta subunit, PheT, central domain; B3/B4 domain of PheRS, PheT

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phenylalanine-tRNA ligase activity
    		•  13.8919118344182 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  12.5698315343202 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  12.5698315343202 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  12.5592545638101 bayes_pls_golite062009
  • ligase activity
    		•  6.92073480193262 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  2.90150581291897 bayes_pls_golite062009
  • glycine-tRNA ligase activity
    		•  2.61548498770105 bayes_pls_golite062009
  • structural molecule activity
    		•  2.54582212334303 bayes_pls_golite062009
  • threonine-tRNA ligase activity
    		•  2.18642354927 bayes_pls_golite062009
  • serine-tRNA ligase activity
    		•  2.07594942154162 bayes_pls_golite062009
  • catalytic activity
    		•  1.99372273395202 bayes_pls_golite062009
  • alanine-tRNA ligase activity
    		•  1.82594054955281 bayes_pls_golite062009
  • lysine-tRNA ligase activity
    		•  1.72324031407565 bayes_pls_golite062009
  • histidine-tRNA ligase activity
    		•  1.72215103383322 bayes_pls_golite062009
  • translation initiation factor activity
    		•  1.27539679024898 bayes_pls_golite062009
  • asparagine-tRNA ligase activity
    		•  0.921492123574877 bayes_pls_golite062009
  • ribonuclease activity
    		•  0.506819168662173 bayes_pls_golite062009
  • binding
    		•  0.311307565529325 bayes_pls_golite062009
  • nuclease activity
    		•  0.29926900436997 bayes_pls_golite062009
  • single-stranded DNA binding
    		•  0.19668406318255 bayes_pls_golite062009
  • aspartate-tRNA ligase activity
    		•  0.00572514744734753 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle