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Protein Overview: RS9_THETN

General Information:
Name(s) found: RS9_THETN [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • 30S ribosomal protein S9 OS=Thermoanaerobacter tengcongensis GN=rpsI PE=3 SV=1 [Swiss-Prot]
    • Organism: Caldanaerobacter subterraneus subsp. tengcongensis
    Length: 130 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATIQYYGTG RRKEAVARVR LMPGKGNIII NNKSLEEYFP LETLRYTVKQ PLILTETIDK  60
   61 FDVYVKVSGG GLSGQAGAIR HGIARALVKA DAELRPILKK AGFLTRDPRM KERRKYGLKK 120
  121 ARKAPQFSKR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..130] PSI-BLAST 46.0 No description for 1vs5I was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  7.32829196949019 bayes_pls_golite062009
  • structural molecule activity
    		•  6.75880680396215 bayes_pls_golite062009
  • RNA binding
    		•  2.94550290381601 bayes_pls_golite062009
  • mRNA binding
    		•  1.42024615739664 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
    		•  1.40738369517171 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
    		•  1.23501489817678 bayes_pls_golite062009
  • exoribonuclease activity
    		•  1.18767335319867 bayes_pls_golite062009
  • ribonuclease activity
    		•  1.03972538466574 bayes_pls_golite062009
  • catalytic activity
    		•  0.878454819018611 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.609202649585287 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.555181608481691 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.499351238958464 bayes_pls_golite062009
  • binding
    		•  0.478154009944658 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.337324481645901 bayes_pls_golite062009
  • nuclease activity
    		•  0.29999921376873 bayes_pls_golite062009
  • tRNA-specific ribonuclease activity
    		•  0.249659703226717 bayes_pls_golite062009
  • kinase activity
    		•  0.237670019875888 bayes_pls_golite062009
  • protein binding
    		•  0.214066724623027 bayes_pls_golite062009
  • DNA binding
    		•  0.0880977286684361 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle