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Protein Overview: gi|157817115, gi...

General Information:
Name(s) found: gi|157817115 [NCBI NR]
gi|149036580 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|157817115|ref|NP_001100074.1| Alstrom syndrome 1 homolog [Rattus norvegicus] [NCBI NR]
  • gi|149036580|gb|EDL91198.1| Alstrom syndrome 1 (predicted), isoform CRA_a [Rattus norvegicus] [NCBI NR]
    • Organism: Rattus norvegicus
    Length: 2564 amino acids

    Gene Ontology:
    Cellular Component: centrosome [UNKNOWN]
    cytosol [UNKNOWN]
    cellular_component [ND]
    Biological Process: biological_process [ND]
    spermatid development [UNKNOWN]
    triglyceride metabolic process [UNKNOWN]
    fat cell differentiation [UNKNOWN]
    regulation of fat cell differentiation [UNKNOWN]
    developmental growth [UNKNOWN]
    cholesterol homeostasis [UNKNOWN]
    retinal rod cell development [UNKNOWN]
    sensory perception of sound [UNKNOWN]
    epithelial cell proliferation [UNKNOWN]
    lipid metabolic process [UNKNOWN]
    apoptosis [UNKNOWN]
    cilium assembly [UNKNOWN]
    glucose homeostasis [UNKNOWN]
    calcium-mediated signaling [UNKNOWN]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPEDLPWPD ELEEEEEEEE EEGKEEAENA SAAATEEART SEETGRLEEE ELEGAGPEVD  60
   61 LDFNSESQLQ ESTDEEEDEL AKAWLQAHPD RPGQGFSLTP PPTPPPSSRH QYRPVEHWGK 120
  121 REVIPLTYRA WQQTSYQDNA RAQFSNSSTL LLEPEFQWDP EEVQRTESWH HLPQERDSFQ 180
  181 TLNISQTGID RVEGAEVKDL PSQEGGESVQ AQCPVKEPKL DLLCSPLLVI QDDFAAPDLP 240
  241 LLTCMTQDQE FEPDSLFQQS ELEFAPLRGI PDKSEDIEWL ARPSEVSEAL IQATSESSSD 300
  301 LVNSCFSISQ HPLTEGLQGK AKSDVLILFG DAKYASIYEN AGAHSERITE LQREVDCSNL 360
  361 SITQAFPSSL PSFVPQEPTI ESEYHSSNLR MLRVSPDTLL TTLTQTTGSV DQKIGAAAIS 420
  421 SPYSHGVQPG SFPQEELPDR HLTEEIRKVS PAPRPAGQKP EMPTVPSSSY SKGIKSVFYR 480
  481 YPMSYSPQGK EPPNVSSVSG SAENALPLTV TSVSQPQRET AKAFYQQTLS DSLLTAETLP 540
  541 VSVIPESGDQ KTHLLSGFSL SYSHRGEDLP EDVVKVSTDS GSVDKKADIP TVSSSTYQHK 600
  601 TKPGIIYYQE FPDSHVPIGT RKVVSQSGAA GQKTDLSAVP STSSSQAEKP VPPSLLTLLG 660
  661 SHLPEDVFKA SYVCKSSEEP SGITALTSVS YSYKGRPNIS HQEKFPDSYL IEEAQKILGS 720
  721 TVTVDQKTVT AKEKPSVFYQ QALPEGGLSA EDLQVDQNIA IPMVTSASFS QREKPQVFYQ 780
  781 EALSGGHLPG EPPGPPDQNT EAPTISPSSY FPGEESIIFY QAGFPGNTPS VVPFKVSRIS 840
  841 ELAEQKTNIT TGPSGSYSVG EKSIIFYHQA LPDGHLSKEA SPAPADLKTG EPPVYSASCS 900
  901 VEVKPIIFYQ QPLSDSPLTK GHNVSVVPGP TDQKTGIPAV PSTSQSYIER RSVSYQQEFP 960
  961 NVSEKALKVL GGVRSTEQKT EIPVVSSALL HTEVPTISSQ EDLPNLTEEA LQILGVAEEV1020
 1021 PSVPSRDKTR LISYQKKLPD GTEVSLKSVG FGSTDQKTGA HIVSSSRREK SSGFHQQELP1080
 1081 NTCGDALGTF HPEPVAQKVG KPTEPSNIQG KASALSPQQL PASHLTGEAL KVSDGSACVA1140
 1141 QMPEAPAGPS IFYFHKERFS NYQKASPDCD LTENSLKSST VPGLSDQKKR PPVSSGSCSH1200
 1201 KEKHKISAAD LLDAQAAELP TVIQRSCLHR EKLAISTVIK PDDPKIPLPT TCHASCAQKV1260
 1261 KPVIFVQKQL SGRDQSEDIP KISTVSEPTV ANTGAPVLLS SSYPYREKSD FSSPKELPDR1320
 1321 HPAKVDMQAS SSLGQADQIS RLPTVPPGTY SHSEKYQLIS EHVQELIDNL NSSESCLNAD1380
 1381 IMMPSNSQID DGVIICKPES SRFANVGCEE IQDIDHGSKT LKEIQTLLME AENMALKRCN1440
 1441 FSVPLVPFRD VSDVSFVQSK KVVCFKETPT SDVCIQKDSF AEEVPHTKYV QKDIGTQTNL1500
 1501 KYQRNVRNWE FISSATFRSP LHEANGTARV AFDENFRQYR ATRSVMRSEP EDCSTGIGDK1560
 1561 IIIPMMTIIK SDSSSDVSDG CCSWDNNLPE SLESVSDVFL NFFPYTSPKT SITDSREEEG1620
 1621 LSESEDGYGS ADSLAAHVKY LLQCESSLNQ AKQILKNAEE EEYRVRAQAW NLKFNLGRDY1680
 1681 GYPVSELNED DRRKVEEIKA KLFGHGRTTH VSEVLQSPRG IGCLPEAVCG HIIIESHEKG1740
 1741 CYRTLTAEQP RPDSCHCVFR SVDPSDLIRG HRSPSSWRGR HINLSRSIDQ SNPHFKIGNS1800
 1801 FQLQSHPPFE KLVPDDIKIS KGVGMPFHEH MDPQPSELIE PTCVPAKEMD FSSSSEILPS1860
 1861 EPKKQFTTSI TFSSHQHSKC ISDSSGFKVD VTAGSQCTGP SLGVFKPHIP EEQISPRDLK1920
 1921 QKISSPSSLQ RHSYTPVTIL VDSSRQRQKL PVDFEHSNQK GKLLQRSAFN FSHSEPSVST1980
 1981 NVSFKGVQFS GNDTIVRQDK LISTVEVKEK NVTLTPDLPS CIFLEQGEES HTPHTDLHMR2040
 2041 KCPSPSGLDI ASCIFLEQHK FFEQSQGQHV DDHEMREDYS LFPKCQGYIA ADPSDFPDQQ2100
 2101 QCKPPGVDGH VRKQHYPLSP VQDCEVEEVQ CIPQSYFSNM VNVEAKVSDM VSPDAPDHFT2160
 2161 AASTPPSSRK ALSCVRITLC PKTPSKLDSG TLDERFHSLD PASKTRINSE FNSDLRIISS2220
 2221 RSLEPTSKLL TCKPVAQDQE SLVFLGPKSP LDLQVAESSL PDSKTISQDL KTTPPQNSQI2280
 2281 VTSRQTQVNI SDLEEYSKPE GTPVPADGSQ EQNKAPFTTS SGMLSSDAVT QVTTESPEKM2340
 2341 TFSSEIFINA DDRGQDIPYP TTQNPSRFAS SSSGQQITAS QGKDAQPVLL PYKPSGSSKM2400
 2401 YYVPLLKPVP SYLDSKSDTT VESSHSGSND AIAPDFPPQV LGTRDDDLST TVNIKHKEGI2460
 2461 YSKRAASKGK QPSQKGNAEA PVQMPVTWDK NVYKENQDEI ISRRVVIETA GPEEMPSQEK2520
 2521 DLAGSSDITV QDRKTGNLPD AKSIKQKEGS LEIESLHFSR WQTV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle