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Protein Overview: REPJ_ECOLX

General Information:
Name(s) found: REPJ_ECOLX [Swiss-Prot]
Description(s) found:
Found 37 descriptions.
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  • Regulatory protein RepA OS=Escherichia coli GN=repA PE=1 SV=1 [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 279 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATHKPINIL EAFAAAPPPL DYVLPNMVAG TVGALVSPGG AGKSMLALQL AAQIAGGPDL  60
   61 LEVGELPTGP VIYLPAEDPP TAIHHRLHAL GAHLSAEERQ AVADGLLIQP LIGSLPNIMA 120
  121 PEWFDGLKRA AEGRRLMVLD TLRRFHIEEE NASGPMAQVI GRMEAIAADT GCSIVFLHHA 180
  181 SKGAAMMGAG DQQQASRGSS VLVDNIRWQS YLSSMTSAEA EEWGVDDDQR RFFVRFGVSK 240
  241 ANYGAPFADR WFRRHDGGVL KPAVLERQRK SKGVPRGEA

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. REPJ_ECOLX gi|134105085, gi... gi|189095939, gi...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..279] PSI-BLAST 47.045757 Hexameric replicative helicase repA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.470983068319171 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle