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Protein Overview: RBSK_ECOLI

General Information:
Name(s) found: RBSK_ECOLI [Swiss-Prot]
Description(s) found:
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  • gi|71152936|sp|P0A9J6.1|RBSK_ECOLI RecName: Full=Ribokinase [NCBI NR]
  • pir||KIECRB ribokinase (EC 2.7.1.15) [validated] - Escherichia coli (strain K-12) [NCBI NR]
  • gi|6137733|pdb|1RKS|A Chain A, E. Coli Ribokinase In Complex With D-Ribose [NCBI NR]
  • gi|6137732|pdb|1RKA|A Chain A, The Apo Form Of E. Coli Ribokinase [NCBI NR]
  • gi|5822396|pdb|1RK2|D Chain D, E. Coli Ribokinase Complexed With Ribose And Adp, Solved In Space Group P212121 [NCBI NR]
  • gi|5822395|pdb|1RK2|C Chain C, E. Coli Ribokinase Complexed With Ribose And Adp, Solved In Space Group P212121 [NCBI NR]
  • gi|5822394|pdb|1RK2|B Chain B, E. Coli Ribokinase Complexed With Ribose And Adp, Solved In Space Group P212121 [NCBI NR]
  • gi|5822393|pdb|1RK2|A Chain A, E. Coli Ribokinase Complexed With Ribose And Adp, Solved In Space Group P212121 [NCBI NR]
  • gi|2981974|pdb|1RKD| Chain , E. Coli Ribokinase Complexed With Ribose And Adp [NCBI NR]
  • gi|290602|gb|AAA62105.1| ribokinase [NCBI NR]
  • pir||G86061 ribokinase [imported] - Escherichia coli (strain O157:H7, substrain EDL933) [NCBI NR]
  • pir||F91215 ribokinase [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) [NCBI NR]
  • gi|209753696|gb|ACI75155.1| regulator for rbs operon [Escherichia coli] [NCBI NR]
  • gi|209753692|gb|ACI75153.1| regulator for rbs operon [Escherichia coli] [NCBI NR]
  • gi|209753690|gb|ACI75152.1| regulator for rbs operon [Escherichia coli] [NCBI NR]
  • gi|18655581|pdb|1GQT|D Chain D, Activation Of Ribokinase By Monovalent Cations [NCBI NR]
  • gi|18655580|pdb|1GQT|C Chain C, Activation Of Ribokinase By Monovalent Cations [NCBI NR]
  • gi|18655579|pdb|1GQT|B Chain B, Activation Of Ribokinase By Monovalent Cations [NCBI NR]
  • gi|18655578|pdb|1GQT|A Chain A, Activation Of Ribokinase By Monovalent Cations [NCBI NR]
  • gi|157833696|pdb|1RKD|A Chain A, E. Coli Ribokinase Complexed With Ribose And Adp [NCBI NR]
  • gi|147516|gb|AAA51476.1| ribokinase [NCBI NR]
  • Ribokinase (EC 2.7.1.15) - Escherichia coli [Swiss-Prot]
  • ribokinase [Escherichia coli K12]gi|15833948|ref|NP_312721.1| ribokinase [Escherichia coli O157:H7]gi|15804352|ref|NP_290391.1| ribokinase [Escherichia coli O157:H7 EDL933]gi|1790193|gb|AAC76775.1| ribokinase [Escherichia coli K12]gi|13364169|dbj|BAB3 [nrdb_11152004_Chlamydomonas]
  • Ribokinase [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • ribokinase [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • Chain C, E. Coli Ribokinase Complexed With Ribose And Adp, Solved In Space Group P212121 [nr-271106-contam.fasta]
  • Chain B, E. Coli Ribokinase Complexed With Ribose And Adp, Solved In Space Group P212121 [nr-271106-contam.fasta]
  • Chain C, Activation Of Ribokinase By Monovalent Cations [nr-271106-contam.fasta]
  • Chain D, E. Coli Ribokinase Complexed With Ribose And Adp, Solved In Space Group P212121 [nr-271106-contam.fasta]
  • Chain A, E. Coli Ribokinase Complexed With Ribose And Adp, Solved In Space Group P212121 [nr-271106-contam.fasta]
  • Chain A, The Apo Form Of E. Coli Ribokinase [nr-271106-contam.fasta]
  • Chain A, E. Coli Ribokinase In Complex With D-Ribose [nr-271106-contam.fasta]
  • Chain A, Activation Of Ribokinase By Monovalent Cations [nr-271106-contam.fasta]
  • Chain , E. Coli Ribokinase Complexed With Ribose And Adp [nr-271106-contam.fasta]
  • Chain D, Activation Of Ribokinase By Monovalent Cations [nr-271106-contam.fasta]
  • Chain B, Activation Of Ribokinase By Monovalent Cations [nr-271106-contam.fasta]
  • Ribokinase OS=Escherichia coli (strain K12) GN=rbsK PE=1 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
    • Organism: Escherichia coli
    Length: 309 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNAGSLVVL GSINADHILN LQSFPTPGET VTGNHYQVAF GGKGANQAVA AGRSGANIAF  60
   61 IACTGDDSIG ESVRQQLATD NIDITPVSVI KGESTGVALI FVNGEGENVI GIHAGANAAL 120
  121 SPALVEAQRE RIANASALLM QLESPLESVM AAAKIAHQNK TIVALNPAPA RELPDELLAL 180
  181 VDIITPNETE AEKLTGIRVE NDEDAAKAAQ VLHEKGIRTV LITLGSRGVW ASVNGEGQRV 240
  241 PGFRVQAVDT IAAGDTFNGA LITALLEEKP LPEAIRFAHA AAAIAVTRKG AQPSVPWREE 300
  301 IDAFLDRQR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..309] PSI-BLAST 64.522879 Ribokinase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ribokinase activity
    		•  4.13972810632318 bayes_pls_golite062009
  • carbohydrate kinase activity
    		•  3.53872211951287 bayes_pls_golite062009
  • kinase activity
    		•  2.44230326483029 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  2.43969902311075 bayes_pls_golite062009
  • transferase activity
    		•  2.15883296431019 bayes_pls_golite062009
  • phosphofructokinase activity
    		•  2.05034657907701 bayes_pls_golite062009
  • catalytic activity
    		•  1.74474587246986 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.01768986812996 bayes_pls_golite062009
  • binding
    		•  0.750579388499649 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.43271347210671 bayes_pls_golite062009
  • DNA binding
    		•  0.0886731070705062 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0561488099067549 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle