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Protein Overview: PO5F1_DANRE

General Information:
Name(s) found: PO5F1_DANRE [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • POU domain, class 5, transcription factor 1 OS=Danio rerio GN=pou5f1 PE=2 SV=1 [Swiss-Prot]
    • Organism: Danio rerio
    Length: 472 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: transcription [IEA]
    multicellular organismal development [IEA]
    embryonic pattern specification [IMP]
    mesoderm development [IMP]
    regulation of transcription, DNA-dependent [IEA]
    anatomical structure morphogenesis [IMP]
    brain development [IMP]
    ectoderm development [IMP]
    regulation of transcription [IEA]
    dorsal/ventral pattern formation [IMP]
    positive regulation of transcription, DNA-dependent [IGI]
    epiboly involved in gastrulation with mouth forming second [IMP]
    morphogenesis of embryonic epithelium [IMP]
    endoderm formation [IMP]
    Molecular Function: DNA binding [IEA]
    transcription factor activity [IEA][IGI]
    transcription regulator activity [IEA]
    sequence-specific DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTERAQSPTA ADCRPYEVNR AMYPQAAGLD GLGGASLQFA HGMLQDPSLI FNKAHFNGIT  60
   61 PATAQTFFPF SGDFKTNDLQ GGDFTQPKHW YPFAAPEFTG QVAGATAATQ PANISPPIGE 120
  121 TREQIKMPSE VKTEKDVEEY GNEENKPPSQ YHLTAGTSSI PTGVNYYTPW NPNFWPGLSQ 180
  181 ITAQANISQA PPTPSASSPS LSPSPPGNGF GSPGFFSGGT AQNIPSAQAQ SAPRSSGSSS 240
  241 GGCSNSEEEE TLTTEDLEQF AKELKHKRIT LGFTQADVGL ALGNLYGKMF SQTTICRFEA 300
  301 LQLSFKNMCK LKPLLQRWLN EAENSENPQD MYKIERVFVD TRKRKRRTSL EGTVRSALES 360
  361 YFVKCPKPNT LEITHISDDL GLERDVVRVW FCNRRQKGKR LALPFDDECV EAQYYEQSPP 420
  421 PPPHMGGTVL PGQGYPGPAH PGGAPALYMP SLHRPDVFKN GFHPGLVGHL NS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle