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Protein Overview: kcnl-1

General Information:
Name(s) found: kcnl-1 / CE40889 [WormBase]
Description(s) found:
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  • WBGene00007176 locus:kcnl-1 status:Confirmed UniProt:G5ED53 protein_id:CAN86597.1 [WormBase]
  • gi|193207101|ref|NP_001122838.1| hypothetical protein B0399.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|148473240|emb|CAN86597.1| C. elegans protein B0399.1f, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|148473068|emb|CAN86620.1| C. elegans protein B0399.1f, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • CE40889 WBGene00007176 status:Confirmed UniProt:A5HWA0_CAEEL protein_id:CAN86620.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE40889 WBGene00007176 status:Confirmed UniProt:A5HWA0_CAEEL protein_id:CAN86620.1| [wormORF-contam.fasta]
  • CE40889 WBGene00007176 status:Confirmed TR:A5HWA0 protein_id:CAN86620.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE40889 WBGene00007176 locus:kcnl-1 status:Confirmed UniProt:A5HWA0 protein_id:CAN86620.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE40889 WBGene00007176 locus:kcnl-1 status:Confirmed UniProt:A5HWA0_CAEEL protein_id:CAN86620.1 [wormbase_c-elegans_197_11-26-2008_reversed.fasta]
  • CE40889 WBGene00007176 locus:kcnl-1 status:Confirmed UniProt:G5ED53 protein_id:CAN86597.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of G5EFI1, KCNN (Potassium K ChaNNel, calcium activated)-Like OS=Caenorhabditis elegans GN=kcnl-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 695 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: potassium ion transport [IEALink to PubMed article]
    Molecular Function: calcium-activated potassium channel activity [IEALink to PubMed article]
    calmodulin binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFLSKQGGA SRSFRLRKKK VPIQERCRST SIPAPLDRRQ GRSCEFHTSD DDRHDRYDNP  60
   61 IAQVSSDILR VSGYTQQFRS LLTARFSPRR ESTPDVTVEA PEDENKNDDR YVNGGVRFDN 120
  121 DVIEEGTASG AASGGVGTPK KIAGFRRRQS GYGIAISSDS TAKMRCRLRK QLFIRRNKVC 180
  181 DISLFLAVLG LLLVIIDSEL TALSSSTGIT KDSPISIILR SACVVSTFFL ICCLINYHAI 240
  241 EVKIALIDSG ADDWRVAFST DRFIKMLIEV CVCMICPFPE IFSDGLMKMP YINADTRQVK 300
  301 MRDVPIDVLL SVPMFLRSYL VCRFMVLHSK QFQDAATRSI AALNRISMDF RFVIKTMMAD 360
  361 HPLRVLIVFT LSYWMCMSWM FTQCERYDGQ LEVEHYYLNS MWFIMVTFMS IGYGDIVPNT 420
  421 YCGRCLSITT GIVGAGVSSA LIAIISRKLE LSRAEKHVNN FMADSKLTNQ RKNAAASVLQ 480
  481 ETWFIHKYKK ALHKGDDLRL RHHQRRFLHS INEFRRIKWD QRKLQEKGNS LLDVGKLHSD 540
  541 MHETLWEMHR TQDHFISQID VLTQKIMELQ MTLNTRPPCC APPTSSSNDA YFSTSTQLGT 600
  601 VLPTVIPTIP LPPTQSPMLH ASQSHREPLQ VTTTTTTSSD GLPRISVGST SSTATSASSG 660
  661 NGSLPQCTVD QLSNCPTGGI YATVTTPLIS NFEEV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] MSA 4.193992 View MSA. No confident structure predictions are available.
    2 View Details [143..537] PSI-BLAST 52.0 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
    3 View Details [538..695] PSI-BLAST 21.154902 No description for 2q0aA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle