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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: kcnl-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFLSKQGGA SRSFRLRKKK VPIQERCRST SIPAPLDRRQ GRSCEFHTSD DDRHDRYDNP  60
   61 IAQVSSDILR VSGYTQQFRS LLTARFSPRR ESTPDVTVEA PEDENKNDDR YVNGGVRFDN 120
  121 DVIEEGTASG AASGGVGTPK KIAGFRRRQS GYGIAISSDS TAKMRCRLRK QLFIRRNKVC 180
  181 DISLFLAVLG LLLVIIDSEL TALSSSTGIT KDSPISIILR SACVVSTFFL ICCLINYHAI 240
  241 EVKIALIDSG ADDWRVAFST DRFIKMLIEV CVCMICPFPE IFSDGLMKMP YINADTRQVK 300
  301 MRDVPIDVLL SVPMFLRSYL VCRFMVLHSK QFQDAATRSI AALNRISMDF RFVIKTMMAD 360
  361 HPLRVLIVFT LSYWMCMSWM FTQCERYDGQ LEVEHYYLNS MWFIMVTFMS IGYGDIVPNT 420
  421 YCGRCLSITT GIVGAGVSSA LIAIISRKLE LSRAEKHVNN FMADSKLTNQ RKNAAASVLQ 480
  481 ETWFIHKYKK ALHKGDDLRL RHHQRRFLHS INEFRRIKWD QRKLQEKGNS LLDVGKLHSD 540
  541 MHETLWEMHR TQDHFISQID VLTQKIMELQ MTLNTRPPCC APPTSSSNDA YFSTSTQLGT 600
  601 VLPTVIPTIP LPPTQSPMLH ASQSHREPLQ VTTTTTTSSD GLPRISVGST SSTATSASSG 660
  661 NGSLPQCTVD QLSNCPTGGI YATVTTPLIS NFEEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle