| Protein: | kcnl-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 695 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for kcnl-1.
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MGFLSKQGGA SRSFRLRKKK VPIQERCRST SIPAPLDRRQ GRSCEFHTSD DDRHDRYDNP 60
61 IAQVSSDILR VSGYTQQFRS LLTARFSPRR ESTPDVTVEA PEDENKNDDR YVNGGVRFDN 120
121 DVIEEGTASG AASGGVGTPK KI
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [143-537] |
1 11 21 31 41 51
| | | | | |
1 AGFRRRQSGY GIAISSDSTA KMRCRLRKQL FIRRNKVCDI SLFLAVLGLL LVIIDSELTA 60
61 LSSSTGITKD SPISIILRSA CVVSTFFLIC CLINYHAIEV KIALIDSGAD DWRVAFSTDR 120
121 FIKMLIEVCV CMICPFPEIF SDGLMKMPYI NADTRQVKMR DVPIDVLLSV PMFLRSYLVC 180
181 RFMVLHSKQF QDAATRSIAA LNRISMDFRF VIKTMMADHP LRVLIVFTLS YWMCMSWMFT 240
241 QCERYDGQLE VEHYYLNSMW FIMVTFMSIG YGDIVPNTYC GRCLSITTGI VGAGVSSALI 300
301 AIISRKLELS RAEKHVNNFM ADSKLTNQRK NAAASVLQET WFIHKYKKAL HKGDDLRLRH 360
361 HQRRFLHSIN EFRRIKWDQR KLQEKGNSLL DVGKL
|
| Detection Method: | |
| Confidence: | 52.0 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [538-695] |
1 11 21 31 41 51
| | | | | |
1 HSDMHETLWE MHRTQDHFIS QIDVLTQKIM ELQMTLNTRP PCCAPPTSSS NDAYFSTSTQ 60
61 LGTVLPTVIP TIPLPPTQSP MLHASQSHRE PLQVTTTTTT SSDGLPRISV GSTSSTATSA 120
121 SSGNGSLPQC TVDQLSNCPT GGIYATVTTP LISNFEEV
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| Detection Method: | |
| Confidence: | 21.154902 |
| Match: | 2q0aA |
| Description: | No description for 2q0aA was found. |
