YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PABC_ECOLI

General Information:
Name(s) found: PABC_ECOLI [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
SHOW ALL
  • Aminodeoxychorismate lyase (EC 4.1.3.38) (4-amino-4-deoxychorismate lyase) (ADC lyase) (ADCL) - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 269 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLINGHKQE SLAVSDRATQ FGDGCFTTAR VIDGKVSLLS AHIQRLQDAC QRLMISCDFW  60
   61 PQLEQEMKTL AAEQQNGVLK VVISRGSGGR GYSTLNSGPA TRILSVTAYP AHYDRLRNEG 120
  121 ITLALSPVRL GRNPHLAGIK HLNRLEQVLI RSHLEQTNAD EALVLDSEGW VTECCAANLF 180
  181 WRKGNVVYTP RLDQAGVNGI MRQFCIRLLA QSSYQLVEVQ ASLEESLQAD EMVICNALMP 240
  241 VMPVCACGDV SFSSATLYEY LAPLCERPN

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. PABC_ECOLI gi|134105085, gi... gi|189095939, gi...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..269] PSI-BLAST 64.221849 Aminodeoxychorismate lyase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • D-alanine:2-oxoglutarate aminotransferase activity
    		•  5.92270586163256 bayes_pls_golite062009
  • branched-chain-amino-acid transaminase activity
    		•  4.40524391258229 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  2.8158800446404 bayes_pls_golite062009
  • transaminase activity
    		•  2.8068647476058 bayes_pls_golite062009
  • catalytic activity
    		•  2.79277628243817 bayes_pls_golite062009
  • 4-amino-4-deoxychorismate lyase activity
    		•  2.07400020867227 bayes_pls_golite062009
  • L-alanine:2-oxoglutarate aminotransferase activity
    		•  1.88117354921159 bayes_pls_golite062009
  • alanine-oxo-acid transaminase activity
    		•  1.88117354921159 bayes_pls_golite062009
  • transferase activity
    		•  1.36772068349993 bayes_pls_golite062009
  • oxo-acid-lyase activity
    		•  0.20929492402161 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle