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Protein Overview: OXYR_ECOLI

General Information:
Name(s) found: OXYR_ECOLI [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • Hydrogen peroxide-inducible genes activator (Morphology and auto-aggregation control protein) - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 305 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIRDLEYLV ALAEHRHFRR AADSCHVSQP TLSGQIRKLE DELGVMLLER TSRKVLFTQA  60
   61 GMLLVDQART VLREVKVLKE MASQQGETMS GPLHIGLIPT VGPYLLPHII PMLHQTFPKL 120
  121 EMYLHEAQTH QLLAQLDSGK LDCVILALVK ESEAFIEVPL FDEPMLLAIY EDHPWANREC 180
  181 VPMADLAGEK LLMLEDGHCL RDQAMGFCFE AGADEDTHFR ATSLETLRNM VAAGSGITLL 240
  241 PALAVPPERK RDGVVYLPCI KPEPRRTIGL VYRPGSPLRS RYEQLAEAIR ARMDGHFDKV 300
  301 LKQAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..88] FFAS03 4.45 LysR-type regulatory protein CbnR
    2 View Details [89..305] PSI-BLAST 36.0 Hydrogen peroxide-inducible genes LysR-type activator OxyR, regulatory domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  3.67519658226073 bayes_pls_golite062009
  • DNA binding
    		•  3.1229077545522 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.10431747895367 bayes_pls_golite062009
  • transcription factor activity
    		•  2.49694475728018 bayes_pls_golite062009
  • binding
    		•  2.03697617454396 bayes_pls_golite062009
  • transcription activator activity
    		•  0.293284204935948 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.266645609122554 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.259857063944388 bayes_pls_golite062009
  • protein binding
    		•  0.00796693091603284 bayes_pls_golite062009
    2
    Term Confidence Notes
  • transcription regulator activity
    		•  2.06846313752146 bayes_pls_golite062009
  • transcription factor activity
    		•  1.54776226622667 bayes_pls_golite062009
  • DNA binding
    		•  1.53867658911479 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.45471488657915 bayes_pls_golite062009
  • binding
    		•  1.29220115989941 bayes_pls_golite062009
  • catalytic activity
    		•  1.04475291968158 bayes_pls_golite062009
  • hydrolase activity
    		•  0.60414047972228 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle