Protein Overview: OTX1A_DANRE

General Information:
Name(s) found:	OTX1A_DANRE [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|49903195\|gb\|AAH76432.1\| Orthodenticle homolog 1 like [Danio rerio] [NCBI NR] gi\|3024327\|sp\|Q90267.1\|OTX1L_DANRE RecName: Full=Homeobox protein Otx1l; Short=zOTX3 [NCBI NR] gi\|220678802\|emb\|CAX13497.1\| orthodenticle homolog 1 like [Danio rerio] [NCBI NR] gi\|18859197\|ref\|NP_571290.1\| orthodenticle homolog 1 like [Danio rerio] [NCBI NR] gi\|1384127\|dbj\|BAA05160.1\| otx homeoprotein [Danio rerio] [NCBI NR] Homeobox protein Otx1l OS=Danio rerio GN=otx1l PE=2 SV=1 [Swiss-Prot] Homeobox protein Otx1l (zOTX3) - Brachydanio rerio (Zebrafish) (Danio rerio) [Swiss-Prot] Homeobox protein OTX1 A OS=Danio rerio GN=otx1a PE=2 SV=1 [Swiss-Prot] (Q90267) Homeobox protein Otx1l (ZOTX3) [Swiss-Prot] orthodenticle homolog 1 like; orthodenticle homolog 3 [071204_hmrz_cont.fasta] orthodenticle homolog 1 like [Danio rerio]gi\|49903195\|gb\|AAH76432.1\| Orthodenticle homolog 1 like [Danio rerio]gi\|3024327\|sp\|Q90267\|OT1L_BRARE Homeobox protein Otx1l (ZOTX3)gi\|1384127\|dbj\|BAA05160.1\| otx homeoprotein [Danio rerio] [nrdb_11152004_Chlamydomonas] otx homeoprotein [Danio rerio] [nr-271106-contam.fasta] Orthodenticle homolog 1 like [Danio rerio] [nr-271106-contam.fasta] Homeobox protein Otx1l (zOTX3) [nr-271106-contam.fasta] orthodenticle homolog 1 like [Danio rerio] [nr-271106-contam.fasta] homeobox protein OTX1 A [Danio rerio] [NCBI-RefSeq_D_rerio_na_08-30-2010_reversed.fasta] RecName: Full=Homeobox protein OTX1 A; AltName: Full=Orthodenticle homolog 1-like; AltName: Full=zOtx3 [NCBI_RefSeq_D_rerio_20120531_05-31-2012_reversed.fasta]
Organism:	Danio rerio
Length:	338 amino acids
Gene Ontology:
Cellular Component:	nucleus [IEA]
Biological Process:	midbrain development [IGI] hindbrain development [IGI] multicellular organismal development [IEA] midbrain-hindbrain boundary development [IGI] regulation of transcription, DNA-dependent [IEA] regulation of transcription [IEA]
Molecular Function:	DNA binding [IEA] transcription factor activity [IEA] transcription regulator activity [IEA] sequence-specific DNA binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSYLKQAPY AMNGLGLGGA TMDLLHPSVG YPTNPRKQRR ERTTFTRTQL DILESLFAKT  60
   61 RYPDIFMREE VALKINLPES RVQVWFKNRR AKCRQQQQQS STNSKIRPAK KKPSPSRESP 120
  121 GSESSGHFTP PAVSSSSSSS SSSSGSNPSA LSGVGLISSS SSGTPVPSIW SPAPVSPVPA 180
  181 PPSLPDISPP ASASCMQRAM SSGGGTTGVP SYPMPYNQAP SYAQGYPTSN AASYFGGMDC 240
  241 GSYLAPMTGH AHHHPHAHHS QLSTAAAVSG HHHPHHIGQS SGHHPHHQGY GGTALPFSSS 300
  301 DCLDYKEQVA SSWKLNFSSA AADCLDYKDQ AAWRFQVL

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.64

Protein Overview: OTX1A_DANRE

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: