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Protein Overview: NFRB_ECOLI

General Information:
Name(s) found: NFRB_ECOLI [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Bacteriophage N4 adsorption protein B - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 745 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDWLLDVFAT WLYGLKVIAI TLAVIMFISG LDDFFIDVVY WVRRIKRKLS VYRRYPRMSY  60
   61 RELYKPDEKP LAIMVPAWNE TGVIGNMAEL AATTLDYENY HIFVGTYPND PDTQRDVDEV 120
  121 CARFPNVHKV VCARPGPTSK ADCLNNVLDA ITQFERSANF AFAGFILHDA EDVISPMELR 180
  181 LFNYLVERKD LIQIPVYPFE REWTHFTSMT YIDEFSELHG KDVPVREALA GQVPSAGVGT 240
  241 CFSRRAVTAL LADGDGIAFD VQSLTEDYDI GFRLKEKGMT EIFVRFPVVD EAKEREQRKF 300
  301 LQHARTSNMI CVREYFPDTF STAVRQKSRW IIGIVFQGFK THKWTSSLTL NYFLWRDRKG 360
  361 AISNFVSFLA MLVMIQLLLL LAYESLWPDA WHFLSIFSGS AWLMTLLWLN FGLMVNRIVQ 420
  421 RVIFVTGYYG LTQGLLSVLR LFWGNLINFM ANWRALKQVL QHGDPRRVAW DKTTHDFPSV 480
  481 TGDTRSLRPL GQILLENQVI TEEQLDTALR NRVEGLRLGG SMLMQGLISA EQLAQALAEQ 540
  541 NGVAWESIDA WQIPSSLIAE MPASVALHYA VLPLRLENDE LIVGSEDGID PVSLAALTRK 600
  601 VGRKVRYVIV LRGQIVTGLR HWYARRRGHD PRAMLYNAVQ HQWLTEQQAG EIWRQYVPHQ 660
  661 FLFAEILTTL GHINRSAINV LLLRHERSSL PLGKFLVTEG VISQETLDRV LTIQRELQVS 720
  721 MQSLLLKAGL NTEQVAQLES ENEGE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..374] PSI-BLAST 29.0 No description for 2d7iA was found.
    2 View Details [375..499] deduced N/A No confident structure predictions are available.
    3 View Details [500..624] PSI-BLAST 10.69897 Structure of the N-terminal domain of XpsE (crystal form P43212)
    4 View Details [625..745] PSI-BLAST 23.69897 Crystal Structure of Vibrio cholerae putative NTPase EpsE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • nucleoside-triphosphatase activity
    		•  0.877006883015441 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.844507013828883 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.834454826299636 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.831965349922447 bayes_pls_golite062009
  • binding
    		•  0.626981987734364 bayes_pls_golite062009
  • transporter activity
    		•  0.48424022775161 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.43068338046008 bayes_pls_golite062009
  • hydrolase activity
    		•  0.35546973066672 bayes_pls_golite062009
  • ATPase activity
    		•  0.329342647154672 bayes_pls_golite062009
  • catalytic activity
    		•  0.234613562021476 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  0.176394296840172 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.0712149467387941 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.0075971145531164 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  0.0031784073031893 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle