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Protein Overview: MSH3_ARATH

General Information:
Name(s) found: MSH3_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana GN=MSH3 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1081 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: mismatch repair [ISS]
    Molecular Function: protein binding [IDA]
    mismatched DNA binding [IDA]
    damaged DNA binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKQKQQTIS RFFAPKPKSP THEPNPVAES STPPPKISAT VSFSPSKRKL LSDHLAAASP  60
   61 KKPKLSPHTQ NPVPDPNLHQ RFLQRFLEPS PEEYVPETSS SRKYTPLEQQ VVELKSKYPD 120
  121 VVLMVEVGYR YRFFGEDAEI AARVLGIYAH MDHNFMTASV PTFRLNFHVR RLVNAGYKIG 180
  181 VVKQTETAAI KSHGANRTGP FFRGLSALYT KATLEAAEDI SGGCGGEEGF GSQSNFLVCV 240
  241 VDERVKSETL GCGIEMSFDV RVGVVGVEIS TGEVVYEEFN DNFMRSGLEA VILSLSPAEL 300
  301 LLGQPLSQQT EKFLVAHAGP TSNVRVERAS LDCFSNGNAV DEVISLCEKI SAGNLEDDKE 360
  361 MKLEAAEKGM SCLTVHTIMN MPHLTVQALA LTFCHLKQFG FERILYQGAS FRSLSSNTEM 420
  421 TLSANTLQQL EVVKNNSDGS ESGSLFHNMN HTLTVYGSRL LRHWVTHPLC DRNLISARLD 480
  481 AVSEISACMG SHSSSQLSSE LVEEGSERAI VSPEFYLVLS SVLTAMSRSS DIQRGITRIF 540
  541 HRTAKATEFI AVMEAILLAG KQIQRLGIKQ DSEMRSMQSA TVRSTLLRKL ISVISSPVVV 600
  601 DNAGKLLSAL NKEAAVRGDL LDILITSSDQ FPELAEARQA VLVIREKLDS SIASFRKKLA 660
  661 IRNLEFLQVS GITHLIELPV DSKVPMNWVK VNSTKKTIRY HPPEIVAGLD ELALATEHLA 720
  721 IVNRASWDSF LKSFSRYYTD FKAAVQALAA LDCLHSLSTL SRNKNYVRPE FVDDCEPVEI 780
  781 NIQSGRHPVL ETILQDNFVP NDTILHAEGE YCQIITGPNM GGKSCYIRQV ALISIMAQVG 840
  841 SFVPASFAKL HVLDGVFTRM GASDSIQHGR STFLEELSEA SHIIRTCSSR SLVILDELGR 900
  901 GTSTHDGVAI AYATLQHLLA EKRCLVLFVT HYPEIAEISN GFPGSVGTYH VSYLTLQKDK 960
  961 GSYDHDDVTY LYKLVRGLCS RSFGFKVAQL AQIPPSCIRR AISMAAKLEA EVRARERNTR1020
 1021 MGEPEGHEEP RGAEESISAL GDLFADLKFA LSEEDPWKAF EFLKHAWKIA GKIRLKPTCS1080
 1081 F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..1081] PSI-BLAST 1000.0 No description for 2o8bB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle