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Protein Overview: HYPF_ECOLI

General Information:
Name(s) found: HYPF_ECOLI [Swiss-Prot]
Description(s) found:
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  • pir||D65051 hypF protein - Escherichia coli (strain K-12) [NCBI NR]
  • gi|2506575|sp|P30131.2|HYPF_ECOLI RecName: Full=Carbamoyltransferase hypF; AltName: Full=Carbamoyl phosphate-converting enzyme hypF; AltName: Full=[NiFe]-hydrogenase maturation factor hypF; Short=Hydrogenase maturation protein hypF [NCBI NR]
  • Carbamoyltransferase hypF (EC 2.1.3.-) (Carbamoyl phosphate-converting enzyme hypF) ([NiFe]-hydrogenase maturation factor hypF) (Hydrogenase maturation protein hypF) - Escherichia coli [Swiss-Prot]
  • hydrogenase maturation protein; transcriptional regulatory protein [Escherichia coli K12]gi|2367152|gb|AAC75754.1| transcriptional regulatory protein; hydrogenase maturation protein [Escherichia coli K12]gi|7449696|pir||D65051 hypF protein - Escherichia [nrdb_11152004_Chlamydomonas]
  • Carbamoyltransferase hypF (Carbamoyl phosphate-converting enzyme hypF) ([NiFe]-hydrogenase maturation factor hypF) (Hydrogenase maturation protein hypF) [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • Carbamoyltransferase hypF OS=Escherichia coli (strain K12) GN=hypF PE=1 SV=2 [uniprot-Ecoli-reviewed-110511.fasta]
  • Carbamoyltransferase HypF OS=Escherichia coli (strain K12) GN=hypF PE=1 SV=2 [uniprot_sprot.fasta.20160308]
    • Organism: Escherichia coli
    Length: 750 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKNTSCGVQ LRIRGKVQGV GFRPFVWQLA QQLNLHGDVC NDGDGVEVRL REDPETFLVQ  60
   61 LYQHCPPLAR IDSVEREPFI WSQLPTEFTI RQSTGGTMNT QIVPDAATCP ACLAEMNTPG 120
  121 ERRYRYPFIN CTHCGPRFTI IRAMPYDRPF TVMAAFPLCP ACDKEYRDPL DRRFHAQPVA 180
  181 CPECGPHLEW VSHGEHAEQE AALQAAIAQL KMGKIVAIKG IGGFHLACDA RNSNAVATLR 240
  241 ARKHRPAKPL AVMLPVADGL PDAARQLLTT PAAPIVLVDK KYVPELCDDI APDLNEVGVM 300
  301 LPANPLQHLL LQELQCPLVM TSGNLSGKPP AISNEQALAD LQGIADGFLI HNRDIVQRMD 360
  361 DSVVRESGEM LRRSRGYVPD ALALPPGFKN VPPVLCLGAD LKNTFCLVRG EQAVLSQHLG 420
  421 DLSDDGIQMQ WREALRLMQN IYDFTPQYVV HDAHPGYVSS QWAREMNLPT QTVLHHHAHA 480
  481 AACLAEHQWP LDGGDVIALT LDGIGMGENG ALWGGECLRV NYRECEHLGG LPAVALPGGD 540
  541 LAAKQPWRNL LAQCLRFVPE WQNYSETASV QQQNWSVLAR AIERGINAPL ASSCGRFFDA 600
  601 VAAALGCAPA TLSYEGEAAC ALEALAASCH GVTHPVTMPR VDNQLDLATF WQQWLNWQAP 660
  661 VNQRAWAFHD ALAQGFAALM REQATMRGIT TLVFSGGVIH NRLLRARLAH YLADFTLLFP 720
  721 QSLPAGDGGL SLGQGVIAAA RWLAGEVQNG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..92] PSI-BLAST 25.69897 Hydrogenase maturation protein HypF N-terminal domain (HypF-ACP)
    2 View Details [93..181] FFAS03 1.36 Solution structure of zf-C2H2 domains from human Zinc finger protein 295
    3 View Details [182..443] PSI-BLAST 58.30103 Hypothetical protein YciO
    4 View Details [444..750] PSI-BLAST 53.154902 No description for 2ivnA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.52035558898316 bayes_pls_golite062009
  • hydrolase activity
    		•  0.582382488349249 bayes_pls_golite062009
    2
    Term Confidence Notes
  • nucleic acid binding
    		•  1.12023123749051 bayes_pls_golite062009
  • binding
    		•  1.0649612944442 bayes_pls_golite062009
  • DNA binding
    		•  0.866878081129177 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.745130007888569 bayes_pls_golite062009
  • catalytic activity
    		•  0.633447548613749 bayes_pls_golite062009
  • protein binding
    		•  0.217824216711205 bayes_pls_golite062009
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.71407687320205 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.75

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle