YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: pb-PA

General Information:
Name(s) found: pb-PA / FBpp0088333 [FlyBase]
Description(s) found:
Found 22 descriptions.
SHOW ALL
  • The gene proboscipedia is referred to in FlyBase by the symbol Dmel\pb (CG31481, FBgn0051481). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:2533518..2567785. It has the cytological map location 84A5. Based on sequence similarity, it is predicted to have molecular function</span>: specific RNA polymerase II transcription factor activity. There is experimental evidence that it is involved in the biological process</span>: specification of segmental identity, labial segment. 86 alleles are reported. The phenotypes of these alleles are annotated with 43 unique terms, many of which group under: adult segment; peripheral nervous system; adult mesothoracic segment; antennal segment; organ system; mouthpart; nervous system; appendage segment; external compound sense organ; primordium. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 782 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS][NAS]
    Biological Process: specification of segmental identity, labial segment [IMP][NAS]
    specification of segmental identity, maxillary segment [NAS]
    regulation of transcription, DNA-dependent [IEA]
    regulation of transcription [IEA]
    regulation of transcription from RNA polymerase II promoter [ISS]
    Molecular Function: transcription factor activity [IEA]
    specific RNA polymerase II transcription factor activity [ISS][NAS]
    sequence-specific DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQEVCSSLDT TSMGTQIKSE SPLNPLQVQT GQTSLPVGGC GGAGVVGGVG GVGVSVGQPG  60
   61 IGQQGVPPVP SVLMVNKMTP NCDKRSADTA YWMTASEGGF INSQPSMAEF LNHLSPESPK 120
  121 IGTPVGSGAI GGVGVNVNVN VGVGVGYPVG VVPQTPDGMD SVPEYPWMKE KKTSRKSSNN 180
  181 NNQGDNSITE FVPENGLPRR LRTAYTNTQL LELEKEFHFN KYLCRPRRIE IAASLDLTER 240
  241 QVKVWFQNRR MKHKRQTLSK TDDEDNKDSL KGDDDQSDSN SNSKKSCQGC ELPSDDIPDS 300
  301 TSNSRGHNNN TPSATNNNPS AGNLTPNSSL ETGISSNLMG STTVSASNVI SADSSVASSV 360
  361 SLDEDIEESS PIKVKKKDDG QVIKKEAVST SSKASPFGYE NSTPSLVSFR RDSDASAVGN 420
  421 APTSKAVGKK RFQSAANAIA TPTPLSDSNS GNGSGGGPAG GYFPGYYPSP KQQQQVQQQQ 480
  481 LHPQQQQLPQ QQPQDYYGKY DIEFAASPHH NPHNKQQALH GEYLSPKPSS ANFHQNSQQQ 540
  541 QQNDHFYYNY NDTNGTPYLN HQQQHHHHAQ HHQQQQHHQN HVADFEGPVN GPSNFNNGAY 600
  601 YDNMSFQQQA QAHQHQTVVF QQQQPHQPAA INHQHMHHLG NGETYSALGL QMENCEGYNN 660
  661 FGAAGTGGGY YEAGQQPPIP ATHGHGHHPH HVQVPAQAHA PIHAHHNSAA IPGGVGVGPP 720
  721 PSHIHGFAIN GGPAVQGQAF GNNGSTAAGT AAISGLENSN SSDFNFLSNL ANDFAPEYYQ 780
  781 LS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..782] PSI-BLAST 4.39794 No description for 1y0fA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle