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Protein Overview: gi|134245382, gi...

General Information:
Name(s) found: gi|134283187 [NCBI NR]
gi|134245382 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|134283187|ref|ZP_01769888.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Burkholderia pseudomallei 305] [NCBI NR]
  • gi|134245382|gb|EBA45475.1| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [Burkholderia pseudomallei 305] [NCBI NR]
    • Organism: Burkholderia pseudomallei 305
    Length: 251 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLIPAIDLK DGQCVRLKQG DMDQATIFSE DPAAMARKWV DLGARRLHLV DLNGAFAGKP  60
   61 KNLEAIEAIL GEVGDEIPVQ LGGGIRSLET IEKYLDAGLS YVIIGTAAVK DPGFLQDACS 120
  121 AFAGNIIVGL DAKDGKVATD GWSKLTGHEV IDLARKFEDY GVESIVYTDI GRDGMLQGIN 180
  181 IEATVKLAQA VGIPVIASGG LSNIVDIEKL CEVEDEGIEG VICGRAIYSG DLDFAAAQKR 240
  241 ADELNGELDD A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..251] PSI-BLAST 43.522879 Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • imidazoleglycerol-phosphate synthase activity
    		•  2.95067072425787 bayes_pls_golite062009
  • catalytic activity
    		•  2.81275055404078 bayes_pls_golite062009
  • 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity
    		•  2.33042272190684 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  1.62677246976022 bayes_pls_golite062009
  • lyase activity
    		•  0.9228652996943 bayes_pls_golite062009
  • indole-3-glycerol-phosphate synthase activity
    		•  0.68686049013171 bayes_pls_golite062009
  • tryptophan synthase activity
    		•  0.58404422121628 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  0.33204235112025 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.1981583216852 bayes_pls_golite062009
  • isomerase activity
    		•  0.14149405165663 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle