Protein Overview: gi|151943518

General Information:
Name(s) found:	gi\|151943518 [NCBI NR]
Description(s) found:	gi\|151943518\|gb\|EDN61829.1\| ligase of succinyl-coa [Saccharomyces cerevisiae YJM789] [NCBI NR]
Organism:	Saccharomyces cerevisiae YJM789
Length:	427 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSRKSLSLI SKCGQLSRLN AQAALQARRH LSIHEYRSAQ LLREYGIGTP EGFPAFTPEE  60
   61 AFEAAKKLNT NKLVIKAQAL TGGRGKGHFD TGYKSGVHMI ESPQQAEDVA KEMLNHNLIT 120
  121 KQTGIAGKPV SAVYIVKRVD TKHEAYLSIL MDRQTKKPMI IASSQGGMNI EEVAERTPDA 180
  181 IKKFSIETSK GLSPQMAKDV AKSLGFSPDA QDEAAKAVSN LYKIFMERDA TQVEINPLSE 240
  241 IEHDPTHKIM CTDAKFGFDD NASFRQEKIY SWRDLSQEDP DEVKAKKYDL NFVKLKGNIG 300
  301 CLVNGAGLAM ATMDVIKLNG GDPANFLDCG GGATPETIKQ GFELILSNKN VDAIFVNIFG 360
  361 GIVRCDYVAL GLVEAARELE VRVPIVARLQ GTKVEEGRDI INKSGVKIYS FDELDPAAKK 420
  421 VVELTQN

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data

[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..50] [139..278]	PSI-BLAST	1084.9691	Succinyl-CoA synthetase, beta-chain, C-terminal domain; Succinyl-CoA synthetase, beta-chain, N-terminal domain
2	View Details	[51..138] [279..427]	PSI-BLAST	1084.9691	Succinyl-CoA synthetase, beta-chain, C-terminal domain; Succinyl-CoA synthetase, beta-chain, N-terminal domain

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
succinate-CoA ligase (GDP-forming) activity	9.38156037766008	bayes_pls_golite062009
succinate-CoA ligase activity	9.37213380498009	bayes_pls_golite062009
CoA-ligase activity	8.19630272128785	bayes_pls_golite062009
acid-thiol ligase activity	7.98453115335343	bayes_pls_golite062009
succinate-CoA ligase (ADP-forming) activity	7.27105019329796	bayes_pls_golite062009
ligase activity, forming carbon-sulfur bonds	7.23103788464777	bayes_pls_golite062009
ligase activity	3.25077459445999	bayes_pls_golite062009
ATP citrate synthase activity	3.09252003125984	bayes_pls_golite062009
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	3.07329302783164	bayes_pls_golite062009
catalytic activity	2.5009559386228	bayes_pls_golite062009
CoA carboxylase activity	1.75094739650292	bayes_pls_golite062009
ligase activity, forming carbon-carbon bonds	1.59015373957506	bayes_pls_golite062009
acetyl-CoA carboxylase activity	1.29064883699349	bayes_pls_golite062009
transferase activity, transferring acyl groups	1.15639517822408	bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds	0.992008268375695	bayes_pls_golite062009
binding	0.346654244533873	bayes_pls_golite062009
biotin carboxylase activity	0.0172732430077291	bayes_pls_golite062009

2

No functions predicted.

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle