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Protein Overview: gi|151943487

General Information:
Name(s) found: gi|151943487 [NCBI NR]
Description(s) found:
  • gi|151943487|gb|EDN61798.1| conserved protein [Saccharomyces cerevisiae YJM789] [NCBI NR]
    • Organism: Saccharomyces cerevisiae YJM789
    Length: 411 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRDPLIGIV GKPSSGKSTT LNSLTDAGAA VGAFPFTTIE PNQATGYLQV ECACSRFGKE  60
   61 DLCKPNYGWC SKGKRHIPIK LLDVAGLVPG AHSGRGLGNK FLDDLRHADA LIHVVDVSGT 120
  121 TDAEGKNTRG YDPLNDIEWL QDEIRLWVEG NLKKRWGSIV RKHTATKSSI VDTLQAQFGG 180
  181 YGSHAPMIQK ALDRLKGLPP LEKWDDEWIT RVVKSFMMEK FPTVLALNKI DHPDADKNVS 240
  241 KIMLKYPDTK AVLTSAVTEV FLRKLKKQGF ILYEEGTEFV DTFEDEPDKL KPLDDKILNR 300
  301 IENIRDLVLY RFGSTGVVQV LQAATDILGL IPVYTVKNIQ TFTGGNGTNV FRDCFLVKRG 360
  361 TPVGKVARYI MGGEVTIASI ETVGGVRVSE ESLVEPGKND ILGFKIAPRS A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..206] PSI-BLAST 40.154902 GTPase Era, N-terminal domain; GTPase Era C-terminal domain
    2 View Details [207..347] PSI-BLAST 40.154902 GTPase Era, N-terminal domain; GTPase Era C-terminal domain
    3 View Details [348..411] MSA 2.126989 View MSA. Confident ab initio structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.01156339800304 bayes_pls_golite062009
  • RNA helicase activity
    		•  1.02424782546779 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • RNA-dependent ATPase activity
    		•  0.95986988363392 bayes_pls_golite062009
  • ATP-dependent RNA helicase activity
    		•  0.94128341275411 bayes_pls_golite062009
  • helicase activity
    		•  0.86558574188931 bayes_pls_golite062009
  • ATP-dependent helicase activity
    		•  0.76276524160073 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
    		•  0.76276524160073 bayes_pls_golite062009
  • hydrolase activity
    		•  0.336064858580953 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.163262043570117 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle