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Protein Overview: GDIA_PANTR

General Information:
Name(s) found: GDIA_PANTR [Swiss-Prot]
Description(s) found:
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  • gi|57113993|ref|NP_001009061.1| GDP dissociation inhibitor 1 [Pan troglodytes] [NCBI NR]
  • gi|56122336|gb|AAV74319.1| GDP dissociation inhibitor 1 [Pan troglodytes] [NCBI NR]
  • gi|38502873|sp|P60028.1|GDIA_PANTR RecName: Full=Rab GDP dissociation inhibitor alpha; Short=Rab GDI alpha; AltName: Full=Guanosine diphosphate dissociation inhibitor 1; Short=GDI-1 [NCBI NR]
  • gi|33354067|dbj|BAC81117.1| GDP dissociation inhibitor 1 [Pan troglodytes] [NCBI NR]
  • Rab GDP dissociation inhibitor alpha OS=Pan troglodytes GN=GDI1 PE=2 SV=1 [Swiss-Prot]
  • GDP dissociation inhibitor 1 [Homo sapiens]gi|4503971|ref|NP_001484.1| GDP dissociation inhibitor 1 [Homo sapiens]gi|12653101|gb|AAH00317.1| GDP dissociation inhibitor 1 [Homo sapiens]gi|15126544|gb|AAH12201.1| GDP dissociation inhibitor 1 [Homo sapien [nrdb_11152004_Chlamydomonas]
  • Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (GDI-1) [Yateslab_human_na_07-28-2006_reversed.fasta]
  • Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (Guanosine diphosphate dissociation inhibitor 1) (GDI-1) [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • GDP dissociation inhibitor 1 [Pan troglodytes] [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • [chimp_Ens_120109_contam.fas]
  • rab GDP dissociation inhibitor alpha [Pan troglodytes] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
    • Organism: Pan troglodytes
    Length: 447 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEEYDVIVL GTGLTECILS GIMSVNGKKV LHMDRNPYYG GESSSITPLE ELYKRFQLLE  60
   61 GPPESMGRGR DWNVDLIPKF LMANGQLVKM LLYTEVTRYL DFKVVEGSFV YKGGKIYKVP 120
  121 STETEALASN LMGMFEKRRF RKFLVFVANF DENDPKTFEG VDPQTTSMRD VYRKFDLGQD 180
  181 VIDFTGHALA LYRTDDYLDQ PCLETVNRIK LYSESLARYG KSPYLYPLYG LGELPQGFAR 240
  241 LSAIYGGTYM LNKPVDDIIM ENGKVVGVKS EGEVARCKQL ICDPSYIPDR VRKAGQVIRI 300
  301 ICILSHPIKN TNDANSCQII IPQNQVNRKS DIYVCMISYA HNVAAQGKYI AIASTTVETT 360
  361 DPEKEVEPAL ELLEPIDQKF VAISDLYEPI DDGCESQVFC SCSYDATTHF ETTCNDIKDI 420
  421 YKRMAGTAFD FENMKRKQND VFGEAEQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..447] PSI-BLAST 1000.0 Crystal structure of the Rab effector guanine nucleotide dissociation inhibitor (GDI) in complex with a geranylgeranyl (GG) peptide

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • small GTPase regulator activity
    		•  1.82777033221452 bayes_pls_golite062009
  • GTPase regulator activity
    		•  1.69589677829425 bayes_pls_golite062009
  • nucleoside-triphosphatase regulator activity
    		•  1.67690582043816 bayes_pls_golite062009
  • binding
    		•  1.28745887296004 bayes_pls_golite062009
  • enzyme regulator activity
    		•  1.00883251592654 bayes_pls_golite062009
  • amine oxidase activity
    		•  0.93095855430028 bayes_pls_golite062009
  • GDP-dissociation inhibitor activity
    		•  0.387378304822822 bayes_pls_golite062009
  • protein binding
    		•  0.347133050347128 bayes_pls_golite062009
  • transporter activity
    		•  0.0442116448779152 bayes_pls_golite062009
  • antioxidant activity
    		•  0.0209903577090486 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.00424758775661527 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle