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Protein Overview: SO3157

General Information:
Name(s) found: SO3157 [shew_pnnl_plus_contams_psm.fasta]
Description(s) found:
  • lipoprotein putative [shew_pnnl_plus_contams_psm.fasta]
    • Organism: Shewanella oneidensis
    Length: 236 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIYKRLFPF IAASAVCLSL SGCSQRISAL NDTVKLAFWG NEDIVLSPEQ VSANPYASIY  60
   61 VKIEDTAQAF VVLAFAEPKI SLSSVKNSPE ELELKWLSAD KGMLVTVNGR LVKTHNLLTG 120
  121 NLAAVESDEP DPLLLGLHLS STPKTWTRML DWQPGYHYSY KVKSEFKLIS DDNILINGTP 180
  181 TQALHFSESV SVDALNIQYQ NEFWLDPQTG SVIKSHQKIA PNLPFIDITL LKPFAA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..236] PSI-BLAST 68.221849 No description for 2in5A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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