YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SO3157
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIYKRLFPF IAASAVCLSL SGCSQRISAL NDTVKLAFWG NEDIVLSPEQ VSANPYASIY  60
   61 VKIEDTAQAF VVLAFAEPKI SLSSVKNSPE ELELKWLSAD KGMLVTVNGR LVKTHNLLTG 120
  121 NLAAVESDEP DPLLLGLHLS STPKTWTRML DWQPGYHYSY KVKSEFKLIS DDNILINGTP 180
  181 TQALHFSESV SVDALNIQYQ NEFWLDPQTG SVIKSHQKIA PNLPFIDITL LKPFAA

Type	Start	End	Confidence
Signal Peptide	1	25	0.98
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	236	0.99