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Protein Overview: SO1776

General Information:
Name(s) found: SO1776 [shew_pnnl_plus_contams_psm.fasta]
Description(s) found:
  • outer membrane protein precursor MtrB [shew_pnnl_plus_contams_psm.fasta]
    • Organism: Shewanella oneidensis
    Length: 697 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFKLNLITL ALLANTGLAV AADGYGLANA NTEKVKLSAW SCKGCVVETG TSGTVGVGVG  60
   61 YNSEEDIRSA NAFGTSNEVA GKFDADLNFK GEKGYRASVD AYQLGMDGGR LDVNAGKQGQ 120
  121 YNVNVNYRQI ATYDSNSALS PYAGIGGNNL TLPDNWITAG SSNQMPLLMD SLNALELSLK 180
  181 RERTGLGFEY QGESLWSTYV NYMREEKTGL KQASGSFFNQ SMMLAEPVDY TTDTIEAGVK 240
  241 LKGDRWFTAL SYNGSIFKNE YNQLDFENAF NPTFGAQTQG TMALDPDNQS HTVSLMGQYN 300
  301 DGSNALSGRI LTGQMSQDQA LVTDNYRYAN QLNTDAVDAK VDLLGMNLKV VSKVSNDLRL 360
  361 TGSYDYYDRD NNTQVEEWTQ ISINNVNGKV AYNTPYDNRT QRFKVAADYR ITRDIKLDGG 420
  421 YDFKRDQRDY QDRETTDENT VWARLRVNSF DTWDMWVKGS YGNRDGSQYQ ASEWTSSETN 480
  481 SLLRKYNLAD RDRTQVEARI THSPLESLTI DVGARYALDD YTDTVIGLTE SKDTSYDANI 540
  541 SYMITADLLA TAFYNYQTIE SEQAGSSNYS TPTWTGFIED QVDVVGAGIS YNNLLENKLR 600
  601 LGLDYTYSNS DSNTQVRQGI TGDYGDYFAK VHNINLYAQY QATEKLALRF DYKIENYKDN 660
  661 DAANDIAVDG IWNVVGFGSN SHDYTAQMLM LSMSYKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..697] FFAS03 2.92 Ferric hydroxamate uptake receptor FhuA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  1.25656963172568 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle