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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SO1776
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFKLNLITL ALLANTGLAV AADGYGLANA NTEKVKLSAW SCKGCVVETG TSGTVGVGVG  60
   61 YNSEEDIRSA NAFGTSNEVA GKFDADLNFK GEKGYRASVD AYQLGMDGGR LDVNAGKQGQ 120
  121 YNVNVNYRQI ATYDSNSALS PYAGIGGNNL TLPDNWITAG SSNQMPLLMD SLNALELSLK 180
  181 RERTGLGFEY QGESLWSTYV NYMREEKTGL KQASGSFFNQ SMMLAEPVDY TTDTIEAGVK 240
  241 LKGDRWFTAL SYNGSIFKNE YNQLDFENAF NPTFGAQTQG TMALDPDNQS HTVSLMGQYN 300
  301 DGSNALSGRI LTGQMSQDQA LVTDNYRYAN QLNTDAVDAK VDLLGMNLKV VSKVSNDLRL 360
  361 TGSYDYYDRD NNTQVEEWTQ ISINNVNGKV AYNTPYDNRT QRFKVAADYR ITRDIKLDGG 420
  421 YDFKRDQRDY QDRETTDENT VWARLRVNSF DTWDMWVKGS YGNRDGSQYQ ASEWTSSETN 480
  481 SLLRKYNLAD RDRTQVEARI THSPLESLTI DVGARYALDD YTDTVIGLTE SKDTSYDANI 540
  541 SYMITADLLA TAFYNYQTIE SEQAGSSNYS TPTWTGFIED QVDVVGAGIS YNNLLENKLR 600
  601 LGLDYTYSNS DSNTQVRQGI TGDYGDYFAK VHNINLYAQY QATEKLALRF DYKIENYKDN 660
  661 DAANDIAVDG IWNVVGFGSN SHDYTAQMLM LSMSYKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle