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Protein Overview: DAPB_PHOLL

General Information:
Name(s) found: DAPB_PHOLL [Swiss-Prot]
Description(s) found:
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  • gi|39930946|sp|Q7N8W3.1|DAPB_PHOLL RecName: Full=Dihydrodipicolinate reductase; Short=DHPR [NCBI NR]
  • Dihydrodipicolinate reductase OS=Photorhabdus luminescens subsp. laumondii GN=dapB PE=3 SV=1 [Swiss-Prot]
  • Dihydrodipicolinate reductase (DHPR) [Photorhabdus luminescens subsp. laumondii TTO1]gi|37524604|ref|NP_927948.1| Dihydrodipicolinate reductase (DHPR) [Photorhabdus luminescens subsp. laumondii TTO1]gi|39930946|sp|Q7N8W3|DAPB_PHOLL Dihydrodipicolinate r [nrdb_11152004_Chlamydomonas]
  • Dihydrodipicolinate reductase (DHPR) [nr-271106-contam.fasta]
  • 4-hydroxy-tetrahydrodipicolinate reductase OS=Photorhabdus luminescens subsp. laumondii (strain TT01) GN=dapB PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Photorhabdus luminescens subsp. laumondii
    Length: 273 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADTDIRVAI VGAGGRMGRQ LIQAIYQLDG VALGAALERS GSSLIGADAG ELAGIGHNGV  60
   61 TVCDDLTSIV DDFDILIDFT RPEGTLTHLE ICRQNGKAIV IGTTGFDEAG KQAIKQASAD 120
  121 IPIVFAANFS VGVNLVLKLL EKAAKVMGEY SDIEIIEAHH RHKVDAPSGT ALAMGESIAH 180
  181 ALGRDLKACA VYAREGYTGE RDPKSIGFAT IRAGDIVGEH TAMFADIGER VEITHKASSR 240
  241 MTFANGAVKA ALWLSGKNSG LFDMKDVLNL DLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..273] PSI-BLAST 77.0 Dihydrodipicolinate reductase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  2.60548927745815 bayes_pls_golite062009
  • catalytic activity
    		•  2.54843319568228 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  1.54909195188343 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
    		•  0.841370849960815 bayes_pls_golite062009
  • saccharopine dehydrogenase activity
    		•  0.495113665163626 bayes_pls_golite062009
  • N-acetyl-gamma-glutamyl-phosphate reductase activity
    		•  0.0651785123513661 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle