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Protein Overview: ALLR_ECOLI

General Information:
Name(s) found: ALLR_ECOLI [Swiss-Prot]
Description(s) found:
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  • gi|82583675|sp|P0ACN4.1|ALLR_ECOLI RecName: Full=HTH-type transcriptional repressor allR; AltName: Full=Negative regulator of allantoin and glyoxylate utilization operons [NCBI NR]
  • pir||A64782 probable transcription regulator ybbU - Escherichia coli (strain K-12) [NCBI NR]
  • gi|2735228|gb|AAB93847.1| glyoxylate regulatory protein [Escherichia coli] [NCBI NR]
  • pir||G90699 repressor of allantoin regulon [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) [NCBI NR]
  • pir||B85550 probable regulator ybbU [imported] - Escherichia coli (strain O157:H7, substrain EDL933) [NCBI NR]
  • gi|209778066|gb|ACI87345.1| repressor of allantoin regulon [Escherichia coli] [NCBI NR]
  • gi|209778064|gb|ACI87344.1| repressor of allantoin regulon [Escherichia coli] [NCBI NR]
  • gi|209778062|gb|ACI87343.1| repressor of allantoin regulon [Escherichia coli] [NCBI NR]
  • gi|209778060|gb|ACI87342.1| repressor of allantoin regulon [Escherichia coli] [NCBI NR]
  • gi|209778058|gb|ACI87341.1| repressor of allantoin regulon [Escherichia coli] [NCBI NR]
  • gi|1773187|gb|AAB40259.1| similar to E. coli iclR [Escherichia coli] [NCBI NR]
  • Negative regulator of allantoin and glyoxylate utilization operons (Transcriptional regulator allR) - Escherichia coli [Swiss-Prot]
  • repressor of allantoin and glyoxylate utilization operons; transcriptional repressor of allantoin metabolism (IclR family) [Escherichia coli K12]gi|15829821|ref|NP_308594.1| repressor of allantoin regulon [Escherichia coli O157:H7]gi|26246515|ref|NP_752 [nrdb_11152004_Chlamydomonas]
  • HTH-type transcriptional repressor allR (Negative regulator of allantoin and glyoxylate utilization operons) [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • glyoxylate regulatory protein [Escherichia coli] [nr-271106-contam.fasta]
  • similar to E. coli iclR [Escherichia coli] [nr-271106-contam.fasta]
  • HTH-type transcriptional repressor AllR OS=Escherichia coli (strain K12) GN=allR PE=1 SV=1 [uniprot-Ecoli-reviewed-110511.fasta]
    • Organism: Escherichia coli
    Length: 271 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEVRRRGRP GQAEPVAQKG AQALERGIAI LQYLEKSGGS SSVSDISLNL DLPLSTTFRL  60
   61 LKVLQAADFV YQDSQLGWWH IGLGVFNVGA AYIHNRDVLS VAGPFMRRLM LLSGETVNVA 120
  121 IRNGNEAVLI GQLECKSMVR MCAPLGSRLP LHASGAGKAL LYPLAEEELM SIILQTGLQQ 180
  181 FTPTTLVDMP TLLKDLEQAR ELGYTVDKEE HVVGLNCIAS AIYDDVGSVV AAISISGPSS 240
  241 RLTEDRFVSQ GELVRDTARD ISTALGLKAH P

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..76] FFAS03 3.76 No description for 2ia2A was found.
    2 View Details [77..271] PSI-BLAST 41.154902 Crystal Structure of the E. coli Glyoxylate Regulatory Protein Ligand Binding Domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transcription regulator activity
    		•  2.80545151006505 bayes_pls_golite062009
  • DNA binding
    		•  2.12853183689157 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.06466906422115 bayes_pls_golite062009
  • transcription factor activity
    		•  2.00805912336419 bayes_pls_golite062009
  • binding
    		•  1.3234252548847 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.462491643657442 bayes_pls_golite062009
  • catalytic activity
    		•  0.319188290441009 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle