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Protein Overview: vab-10

General Information:
Name(s) found: vab-10 / CE36462 [WormBase]
Description(s) found:
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  • WBGene00006876 locus:vab-10 status:Partially_confirmed UniProt:G5EFK7 protein_id:CAH04742.1 [WormBase]
  • gi|71997225|ref|NP_001021858.1| Variable ABnormal morphology family member (vab-10) [Caenorhabditis elegans] [NCBI NR]
  • gi|50507831|emb|CAH04742.1| C. elegans protein ZK1151.1f, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|50507817|emb|CAH04710.1| C. elegans protein ZK1151.1f, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • Hypothetical protein ZK1151.1f [Caenorhabditis elegans]gi|50507817|emb|CAH04710.1| Hypothetical protein ZK1151.1f [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE36462 WBGene00006876 locus:vab-10 status:Partially_confirmed TR:Q6BEQ3 protein_id:CAH04742.1 [wormpep150.fasta]
  • 36462 WBGene00006876 locus:vab-10 status:Confirmed protein_id:CAH04742.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • CE36462 WBGene00006876 locus:vab-10 status:Confirmed TR:Q6BEQ3 protein_id:CAH04742.1 [wormpep132.fasta]
  • 36462 WBGene00006876 locus:vab-10 status:Partially_confirmed TR:Q6BEQ3 protein_id:CAH04742.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE36462 WBGene00006876 locus:vab-10 status:Partially_confirmed UniProt:Q6BEQ3_CAEEL protein_id:CAH04742.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE36462 WBGene00006876 locus:vab-10 status:Partially_confirmed UniProt:Q6BEQ3_CAEEL protein_id:CAH04742.1| [wormORF-contam.fasta]
  • Hypothetical protein ZK1151.1f [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Variable ABnormal morphology family member (vab-10) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE36462 WBGene00006876 locus:vab-10 status:Partially_confirmed UniProt:Q6BEQ3 protein_id:CAH04742.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE36462 WBGene00006876 locus:vab-10 status:Partially_confirmed UniProt:G5EFK7 protein_id:CAH04742.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of G5EDD3, Uncharacterized protein OS=Caenorhabditis elegans GN=vab-10 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 3322 amino acids

    Gene Ontology:
    Cellular Component: intracellular organelle [IDALink to PubMed article]
    basal plasma membrane [IDALink to PubMed article]
    membrane [IEALink to PubMed article]
    intermediate filament [IDALink to PubMed article]
    apical plasma membrane [IDALink to PubMed article]
    proteinaceous extracellular matrix [IEALink to PubMed article]
    Biological Process: cell cycle arrest [IEALink to PubMed article]
    DNA repair [IEALink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    signal transduction [IEALink to PubMed article]
    locomotion [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    protein amino acid dephosphorylation [IEALink to PubMed article]
    cell adhesion [IEALink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    blood coagulation [IEALink to PubMed article]
    reproduction [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    chemotaxis [IEALink to PubMed article]
    locomotory behavior [IMPLink to PubMed articleLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    morphogenesis of an epithelium [IMPLink to PubMed article]
    gastrulation with mouth forming first [IMPLink to PubMed article]
    Molecular Function: actin binding [IEALink to PubMed article]
    protein tyrosine phosphatase activity [IEALink to PubMed article]
    calcium ion binding [IEALink to PubMed article]
    signal transducer activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGERYRSHH AVDPSDAQEK EVLDHYELNR EKYNDERDNV QKKTFTKWVN KHLSKTDHKI  60
   61 DDLFVDLRDG YALIALLEAL TGERIQKENG YTRFHRIQNV QYCLDFLKKK NIKLVNIRPE 120
  121 DIVEGNGKLT LGLIWTIILN FQVSVIRQRL LLESSQHEQM SAKHTTTNSQ VSLHGSDATS 180
  181 ARDALLQWAR RVTAGYPRVN VNNFSSSWRD GLAFNAILHR YRSSAIDWNK ISSDSVSNTE 240
  241 RLNNAFAAAD REFGVERLLD AEDVDTNNPD EKSIITYVSS LYNALPHEPE MSRLQKVQEE 300
  301 YIEEAYEWRE WVVRAIQLVD DRHLQGTASE LIYELQRFRE DDLPPREEQK RRLTLVYEHL 360
  361 EKVMRSTELF AIPHELSAPE LQRVWNELQN SIDRRFDVLE RHRIQEGNSN DLLSRLARGI 420
  421 GITNEKLDLI LKRIEDVEAR VDTSPPAAVE RTVSEIVDDL NALESPIARF FEDVEELKSM 480
  481 QHPEANDFYK QVYGLHQRRT TYLDRLTNQI LVRLGVRTDS LHKENQQRLE NMRKTSFSRV 540
  541 EECIEWVRVR MEKLTTMEFL EDLETLEHVF EQHKFDNRDI QDFRQNVDEC IARQAEVSAE 600
  601 DTYEYCELLR VLESEYQQLR DLSAGRMLDL DSLIAFVRAA QLELIWVSER ESIEVTRNWS 660
  661 DIKQLDLPML TNYYKQLLHE MELREKQYND VHNQGAALLN QGHPAIRVIE VYLRQMQSQW 720
  721 DWLLALSKCL EEHLRDALNL KSFMEEASDA EAWIQEQSVR LENNYNRTDF SLEEGERFLR 780
  781 ELDEIKEILN KYHQVLMALT ERCASISPLW QRGERIPHPI KVTALCDYSD ENVTIKAGDD 840
  841 VYLLDNSDLI KWTIRDISGA EGQVPSVVFR IPPTDARLTA LLNRLLQQFE KLKKLWDKKH 900
  901 RMVRFNMVLN TMRTIQGWDL DTFNSIDPDQ RDAIMKALND DANKLLSELD PNDPLALRLR 960
  961 EELRRTNEHF WNLLNASQKP PEPDWASQYD QKMAELLKKL EEAWRELNDA VGKPISRSPE1020
 1021 DLERVIHAHK RFEDALQALD SDVANVKELF RQLPNPTPTQ RVNHDRLNGL WDDLWDLSRM1080
 1081 YVERIKVLES VLNGMVEVAD IVRQHEITLN SFDDLPAALD KLRGHHSQLL EINMVLKVSK1140
 1141 LGAQNEHFSQ QQTVIDQLNR NVALLRQHVS RTRINEGHHP DVDAIEDEVQ KLNVRWENVN1200
 1201 SQIASRLLAV ESALQIQMVY RSEYETEMSW LDTVEETINR LRKPEELRPE QYQQQLDMLI1260
 1261 AEYTNLQEHT QAIEHVNKEG GRFIHEAKIF DAKLGQYSDG IVGIHGPGIK SEFRRTKPQP1320
 1321 KNGSQIVTEE LELLNRRFAQ LSSLILERRN TMQVLIQNWK RQKQKPDFDL KIQKPTMNIE1380
 1381 PVVTSAGDEW EIVDPIGDRA KISEVEDEMQ TFAEETITNT QFYEMEGNLN KKTGEVLTFI1440
 1441 EAIRQGNLTA AGQFFDIPSA SVMSLEEAAK YGLVEQDLPT VLNTTWGIHH PETRQPITLS1500
 1501 EAIRIGLYDS NIRQFRDIHT GEILSQSDLM SKGIANWETV LKLIKEKIMK LPPTSLANAL1560
 1561 EKRMVDPQTG VFKGRTTDME LQLWAAIYHG YLSIENPEHV TTIGTSLTDA IENGFINANN1620
 1621 AEFNDRNSND SFKLRDAVSK RTGLINNDVV EIVQMTDDEK KRVPLGAALV RNVIGVKDGK1680
 1681 YTNLASRQSM SLKEAHQDGL IGKALTLEEA AQNKLVDSSG YFVDRGILGQ RYTLLEAIVA1740
 1741 GLIDAEVRHI VDPNENDVIS ISEAMERGLL LPNGKIVLEK DEKEFTIPEA VHEGLLTKRV1800
 1801 RHSIFNIRGI RNTETSQNLS FNEAVEAGVI IPNAERVVDL QTQESFLITD DRAKNLIEVA1860
 1861 LHELLTTPVG IKNDRGAYEL NLVRAVSSGI IDPVKGVFFN KNTKHELSTK EAYEQGFITL1920
 1921 RGALKVFGLL NVPPALVTPA KKLDRTRRIG RPGQEGGADG NHVTVTLQDA MRQGLVGNQR1980
 1981 YVHGKVDLSL EEALNRGLLD PNSQWIMPDQ SKGDGPTIEE KTTETMTETG QQLAPKYFPD2040
 2041 KNIEESVTTV KRVRTTETTA LGGPGGVSVY RSIAGGKGAL EVPSRGYHIY EAERKGLIDL2100
 2101 TNGKISAPNV DRVLSFAEGI ELGIIDATTI QVSTGGRSVS VKEALEKKIM ESDGSVNGRN2160
 2161 IEQAVEAKTI VIDAEPLVPY NNQSKNIIQI PSGNGPIISF RQVGQPVVEE STQSWEFDTQ2220
 2221 QGVFVDNLTG EKLSLERALA TGKVAPEDIS VRDGLTGREM PLEEAEKWGI IDSKNRYYFD2280
 2281 KSQNKRMSYT EAAQQHLMYL TGGVPENASD AVHTTVKVQT RTAVAKKEAL SSGLPLSDYS2340
 2341 LGKALSLGWY DQSAGTFTHP ETQKQLTLKE AIMKGLFDPY DTTIVDKKAG KEISLLEAIR2400
 2401 EEIVDDNAGT VKDTQTGRVH NFLEAGNLGL VKGKNFGDTL DSSLFSGRLD LGSGSYTRPS2460
 2461 GGSSMPIHEA INRNYVDRSS VSVRDPSSGQ QYSYQEAVDR RIVDADRGLI HGGGDSTSFS2520
 2521 QGLTSGHLVS SGSSRPTSGN QSRLVEQRLQ LTPFAPNGGA GRSRDGRHEL VDLGGGQQVQ2580
 2581 VKVVRGEGGV EKGEYTDPKS GMKFTIQMHG DPVVTETKTS VKSTSQVHSV ELEPHAEFVG2640
 2641 IDRVRDKRNN HVYSLEEARR LGLAKVDKKG KQMTRSYQAF RSNIDNAVNN GVVDSHNQKI2700
 2701 SLENAIHARI IDIRNLSYHH PTHGSVDLKT AASQGLVDVT LSEVLPKGII HPGTGERIDI2760
 2761 KRGIELRIID AATGKVRDPR DNKTITWIDI LKPVYQAIAS EGVFDPTKGH HVPVTTALND2820
 2821 GLINASTGNY RNSITGEDVP LSDTVDRGLI DRSTYETITK PFFTDYRSNR KLNLVEAVRE2880
 2881 RLIDPKNRTI QLSRQSIVPI AKAVQDGRIP MEIGEKLRKV DKLNFAEALG KGLIDSKQNV2940
 2941 FTDPDTGRQM SIAQAIQEGF IDTGSVQGIE GNDESNLFNV LQSSDFDETS GRIYDKKSSL3000
 3001 HLTFNDAVRR GVIDGDSLLH LQATGDLLTL RDALHQNKID SNGKFVEGAN RLKISDAVKS3060
 3061 GRLTVIASPS EAVQAVTEGV KRRDAEGYKF RISEYDDSQA QRQSVPKFRE TVTVSKLTPQ3120
 3121 YNEPGLSVRM RQSTTSIGDR ASKFLEDPSQ LAEIQQDFLS SLEAAQFDTD EKVIEHPHTR3180
 3181 QRVSVREAAE TGLLDVQTGE IVNPDNGRRF SIPRAVHMKL VGGDAAKRIM EQLNMPVEEV3240
 3241 AYATQTITSS THRAPSPVFA TASVSQPSGG ATTTREFTRT INWHGQPSEL RNSQTDPLAA3300
 3301 YTTVSSNVTE STEDAPAWAR KQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle