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Protein Overview: vab-10

General Information:
Name(s) found: vab-10 / CE36460 [WormBase]
Description(s) found:
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  • WBGene00006876 locus:vab-10 status:Partially_confirmed UniProt:G5EFW2 protein_id:CAH04740.1 [WormBase]
  • gi|71997215|ref|NP_001021856.1| Variable ABnormal morphology family member (vab-10) [Caenorhabditis elegans] [NCBI NR]
  • gi|50507829|emb|CAH04740.1| C. elegans protein ZK1151.1d, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|50507815|emb|CAH04708.1| C. elegans protein ZK1151.1d, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • Hypothetical protein ZK1151.1d [Caenorhabditis elegans]gi|50507815|emb|CAH04708.1| Hypothetical protein ZK1151.1d [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE36460 WBGene00006876 locus:vab-10 status:Partially_confirmed TR:Q6BEQ5 protein_id:CAH04740.1 [wormpep150.fasta]
  • 36460 WBGene00006876 locus:vab-10 status:Predicted protein_id:CAH04740.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • CE36460 WBGene00006876 locus:vab-10 status:Predicted TR:Q6BEQ5 protein_id:CAH04740.1 [wormpep132.fasta]
  • 36460 WBGene00006876 locus:vab-10 status:Partially_confirmed TR:Q6BEQ5 protein_id:CAH04740.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE36460 WBGene00006876 locus:vab-10 status:Partially_confirmed UniProt:Q6BEQ5_CAEEL protein_id:CAH04740.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE36460 WBGene00006876 locus:vab-10 status:Partially_confirmed UniProt:Q6BEQ5_CAEEL protein_id:CAH04740.1| [wormORF-contam.fasta]
  • Hypothetical protein ZK1151.1d [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Variable ABnormal morphology family member (vab-10) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE36460 WBGene00006876 locus:vab-10 status:Partially_confirmed UniProt:Q6BEQ5 protein_id:CAH04740.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE36460 WBGene00006876 locus:vab-10 status:Partially_confirmed UniProt:G5EFW2 protein_id:CAH04740.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of G5EDD3, Uncharacterized protein OS=Caenorhabditis elegans GN=vab-10 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 3405 amino acids

    Gene Ontology:
    Cellular Component: intracellular organelle [IDALink to PubMed article]
    basal plasma membrane [IDALink to PubMed article]
    membrane [IEALink to PubMed article]
    intermediate filament [IDALink to PubMed article]
    apical plasma membrane [IDALink to PubMed article]
    proteinaceous extracellular matrix [IEALink to PubMed article]
    Biological Process: cell cycle arrest [IEALink to PubMed article]
    DNA repair [IEALink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    signal transduction [IEALink to PubMed article]
    locomotion [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    protein amino acid dephosphorylation [IEALink to PubMed article]
    cell adhesion [IEALink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    blood coagulation [IEALink to PubMed article]
    reproduction [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    chemotaxis [IEALink to PubMed article]
    locomotory behavior [IMPLink to PubMed articleLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    morphogenesis of an epithelium [IMPLink to PubMed article]
    gastrulation with mouth forming first [IMPLink to PubMed article]
    Molecular Function: actin binding [IEALink to PubMed article]
    protein tyrosine phosphatase activity [IEALink to PubMed article]
    calcium ion binding [IEALink to PubMed article]
    signal transducer activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGERYRSHH AVDPSDAQEK EVLDHYELNR EKYNDERDNV QKKTFTKWVN KHLSKTDHKI  60
   61 DDLFVDLRDG YALIALLEAL TGERIQKENG YTRFHRIQNV QYCLDFLKKK NVSVIRQRLL 120
  121 LESSQHEQMS AKHTTTNSQV SLHGSDATSA RDALLQWARR VTAGYPRVNV NNFSSSWRDG 180
  181 LAFNAILHRY RSSAIDWNKI SSDSVSNTER LNNAFAAADR EFGVERLLDA EDVDTNNPDE 240
  241 KSIITYVSSL YNALPHEPEM SRLQKVQEEY IEEAYEWREW VVRAIQLVDD RHLQGTASEL 300
  301 IYELQRFRED DLPPREEQKR RLTLVYEHLE KVMRSTELFA IPHELSAPEL QRVWNELQNS 360
  361 IDRRFDVLER HRIQEGNSND LLSRLARGIG ITNEKLDLIL KRIEDVEARV DTSPPAAVER 420
  421 TVSEIVDDLN ALESPIARFF EDVEELKSMQ HPEANDFYKQ VYGLHQRRTT YLDRLTNQIL 480
  481 VRLGVRTDSL HKENQQRLEN MRKTSFSRVE ECIEWVRVRM EKLTTMEFLE DLETLEHVFE 540
  541 QHKFDNRDIQ DFRQNVDECI ARQAEVSAED TYEYCELLRV LESEYQQLRD LSAGRMLDLD 600
  601 SLIAFVRAAQ LELIWVSERE SIEVTRNWSD IKQLDLPMLT NYYKQLLHEM ELREKQYNDV 660
  661 HNQGAALLNQ GHPAIRVIEV YLRQMQSQWD WLLALSKCLE EHLRDALNLK SFMEEASDAE 720
  721 AWIQEQSVRL ENNYNRTDFS LEEGERFLRE LDEIKEILNK YHQVLMALTE RCASISPLWQ 780
  781 RGERIPHPIK VTALCDYSDE NVTIKAGDDV YLLDNSDLIK WTIRDISGAE GQVPSVVFRI 840
  841 PPTDARLTAL LNRLLQQFEK LKKLWDKKHR MVRFNMVLNT MRTIQGWDLD TFNSIDPDQR 900
  901 DAIMKALNDD ANKLLSELDP NDPLALRLRE ELRRTNEHFW NLLNASQKPP EPDWASQYDQ 960
  961 KMAELLKKLE EAWRELNDAV GKPISRSPED LERVIHAHKR FEDALQALDS DVANVKELFR1020
 1021 QLPNPTPTQR VNHDRLNGLW DDLWDLSRMY VERIKVLESV LNGMVEVADI VRQHEITLNS1080
 1081 FDDLPAALDK LRGHHSQLLE INMVLKVSKL GAQNEHFSQQ QTVIDQLNRN VALLRQHVSR1140
 1141 TRINEGHHPD VDAIEDEVQK LNVRWENVNS QIASRLLAVE SALQIQMVYR SEYETEMSWL1200
 1201 DTVEETINRL RKPEELRPEQ YQQQLDMLIA EYTNLQEHTQ AIEHVNKEGG RFIHEAKIFD1260
 1261 AKLGQYSDGI VGIHGPGIKS EFRRTKPQPK NGSQIVTEEL ELLNRRFAQL SSLILERRNT1320
 1321 MQVLIQNWKR QKQEEEDRRR AEEEEKRRAF EAARLKALED AERLRRERED AEARRRAKDD1380
 1381 ADRARRMAED AERARREAEE AERRRREEEE RRRREAEDRK RRQDEEDRRR REEEERRRRE1440
 1441 EEEKRRKKPD FDLKIQKPTM NIEPVVTSAG DEWEIVDPIG DRAKISEVED EMQTFAEETI1500
 1501 TNTQFYEMEG NLNKKTGEVL TFIEAIRQGN LTAAGQFFDI PSASVMSLEE AAKYGLVEQD1560
 1561 LPTVLNTTWG IHHPETRQPI TLSEAIRIGL YDSNIRQFRD IHTGEILSQS DLMSKGIANW1620
 1621 ETVLKLIKEK IMKLPPTSLA NALEKRMVDP QTGVFKGRTT DMELQLWAAI YHGYLSIENP1680
 1681 EHVTTIGTSL TDAIENGFIN ANNAEFNDRN SNDSFKLRDA VSKRTGLINN DVVEIVQMTD1740
 1741 DEKKRVPLGA ALVRNVIGVK DGKYTNLASR QSMSLKEAHQ DGLIGKALTL EEAAQNKLVD1800
 1801 SSGYFVDRGI LGQRYTLLEA IVAGLIDAEV RHIVDPNEND VISISEAMER GLLLPNGKIV1860
 1861 LEKDEKEFTI PEAVHEGLLT KRVRHSIFNI RGIRNTETSQ NLSFNEAVEA GVIIPNAERV1920
 1921 VDLQTQESFL ITDDRAKNLI EVALHELLTT PVGIKNDRGA YELNLVRAVS SGIIDPVKGV1980
 1981 FFNKNTKHEL STKEAYEQGF ITLRGALKVF GLLNVPPALV TPAKKLDRTR RIGRPGQEGG2040
 2041 ADGNHVTVTL QDAMRQGLVG NQRYVHGKVD LSLEEALNRG LLDPNSQWIM PDQSKGDGPT2100
 2101 IEEKTTETMT ETGQQLAPKY FPDKNIEESV TTVKRVRTTE TTALGGPGGV SVYRSIAGGK2160
 2161 GALEVPSRGY HIYEAERKGL IDLTNGKISA PNVDRVLSFA EGIELGIIDA TTIQVSTGGR2220
 2221 SVSVKEALEK KIMESDGSVN GRNIEQAVEA KTIVIDAEPL VPYNNQSKNI IQIPSGNGPI2280
 2281 ISFRQVGQPV VEESTQSWEF DTQQGVFVDN LTGEKLSLER ALATGKVAPE DISVRDGLTG2340
 2341 REMPLEEAEK WGIIDSKNRY YFDKSQNKRM SYTEAAQQHL MYLTGGVPEN ASDAVHTTVK2400
 2401 VQTRTAVAKK EALSSGLPLS DYSLGKALSL GWYDQSAGTF THPETQKQLT LKEAIMKGLF2460
 2461 DPYDTTIVDK KAGKEISLLE AIREEIVDDN AGTVKDTQTG RVHNFLEAGN LGLVKGKNFG2520
 2521 DTLDSSLFSG RLDLGSGSYT RPSGGSSMPI HEAINRNYVD RSSVSVRDPS SGQQYSYQEA2580
 2581 VDRRIVDADR GLIHGGGDST SFSQGLTSGH LVSSGSSRPT SGNQSRLVEQ RLQLTPFAPN2640
 2641 GGAGRSRDGR HELVDLGGGQ QVQVKVVRGE GGVEKGEYTD PKSGMKFTIQ MHGDPVVTET2700
 2701 KTSVKSTSQV HSVELEPHAE FVGIDRVRDK RNNHVYSLEE ARRLGLAKVD KKGKQMTRSY2760
 2761 QAFRSNIDNA VNNGVVDSHN QKISLENAIH ARIIDIRNLS YHHPTHGSVD LKTAASQGLV2820
 2821 DVTLSEVLPK GIIHPGTGER IDIKRGIELR IIDAATGKVR DPRDNKTITW IDILKPVYQA2880
 2881 IASEGVFDPT KGHHVPVTTA LNDGLINAST GNYRNSITGE DVPLSDTVDR GLIDRSTYET2940
 2941 ITKPFFTDYR SNRKLNLVEA VRERLIDPKN RTIQLSRQSI VPIAKAVQDG RIPMEIGEKL3000
 3001 RKVDKLNFAE ALGKGLIDSK QNVFTDPDTG RQMSIAQAIQ EGFIDTGSVQ GIEGNDESNL3060
 3061 FNVLQSSDFD ETSGRIYDKK SSLHLTFNDA VRRGVIDGDS LLHLQATGDL LTLRDALHQN3120
 3121 KIDSNGKFVE GANRLKISDA VKSGRLTVIA SPSEAVQAVT EGVKRRDAEG YKFRISEYDD3180
 3181 SQAQRQSVPK FRETVTVSKL TPQYNEPGLS VRMRQSTTSI GDRASKFLED PSQLAEIQQD3240
 3241 FLSSLEAAQF DTDEKVIEHP HTRQRVSVRE AAETGLLDVQ TGEIVNPDNG RRFSIPRAVH3300
 3301 MKLVGGDAAK RIMEQLNMPV EEVAYATQTI TSSTHRAPSP VFATASVSQP SGGATTTREF3360
 3361 TRTINWHGQP SELRNSQTDP LAAYTTVSSN VTESTEDAPA WARKQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle