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Protein Overview: lgc-7

General Information:
Name(s) found: lgc-7 / CE36675 [WormBase]
Description(s) found:
Found 14 descriptions.
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  • WBGene00013300 locus:lgc-7 status:Partially_confirmed UniProt:O18228 protein_id:CAB16504.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 439 amino acids

    Gene Ontology:
    Cellular Component: postsynaptic membrane [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: ion transport [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: neurotransmitter receptor activity [IEALink to PubMed article]
    extracellular ligand-gated ion channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFYDFKFVF YLAISWCNLL EVDGITVAEQ LKDVLMEGYD SSIRPVNNER DILIINISMN  60
   61 TMSVLTLDPA EETINFSSEF ILQWKDEFLF WNKSDYNITW LKLKESFLWT PDTTVSTSID 120
  121 TNYLIDASER YVSVKHDGTV RQSIYAVFTN LCDMNVDKFP YDQQTCMIKM GPWSYTTQEV 180
  181 TCIVGRDIAP NDTDFGDFHG NSEWDFEGIV SSVGETEDPD VNFTFSEVHF ALTVKRRPQF 240
  241 YVWVLLIPTY IITVVCIFGL FTPTANHGLR EERVNLGITT LLSSAVILQI VANAMPKTSE 300
  301 LPLLGNFILA EIFVVAIGVL FAVLVLTLHQ RAHTREWRPP AWMLWILRMT GSSKFLSRNI 360
  361 TKIRHKSSTA ERIHYTGEGA YLFKNLDESL QSVREYIQEE DRDYFRELTY VKFFDRLDFL 420
  421 LLFIFQVGNA LVTLFLVKQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..439] PSI-BLAST 75.154902 Refined structure of the nicotinic acetylcholine receptor at 4A resolution.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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