| Protein: | lgc-7 |
| Organism: | Caenorhabditis elegans |
| Length: | 439 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lgc-7.
| Description | E-value | Query Range |
Subject Range |
|
|
352.0 | [0..26] | [438..202] |
|
Region A: Residues: [1-439] |
1 11 21 31 41 51
| | | | | |
1 MNFYDFKFVF YLAISWCNLL EVDGITVAEQ LKDVLMEGYD SSIRPVNNER DILIINISMN 60
61 TMSVLTLDPA EETINFSSEF ILQWKDEFLF WNKSDYNITW LKLKESFLWT PDTTVSTSID 120
121 TNYLIDASER YVSVKHDGTV RQSIYAVFTN LCDMNVDKFP YDQQTCMIKM GPWSYTTQEV 180
181 TCIVGRDIAP NDTDFGDFHG NSEWDFEGIV SSVGETEDPD VNFTFSEVHF ALTVKRRPQF 240
241 YVWVLLIPTY IITVVCIFGL FTPTANHGLR EERVNLGITT LLSSAVILQI VANAMPKTSE 300
301 LPLLGNFILA EIFVVAIGVL FAVLVLTLHQ RAHTREWRPP AWMLWILRMT GSSKFLSRNI 360
361 TKIRHKSSTA ERIHYTGEGA YLFKNLDESL QSVREYIQEE DRDYFRELTY VKFFDRLDFL 420
421 LLFIFQVGNA LVTLFLVKQ
|
| Detection Method: |  |
| Confidence: | 75.154902 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
