YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: mys-3

General Information:
Name(s) found: mys-3 / CE37036 [WormBase]
Description(s) found:
Found 15 descriptions.
SHOW ALL
  • WBGene00045419 locus:lsy-12 status:Partially_confirmed UniProt:Q21789 protein_id:CAA96668.3 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 568 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: positive regulation of vulval development [IMPLink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: binding [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTSSKRRN TNNSRCASLL SNPHSTPVTR LMRGILDSEN SDNDEMLSND QSEIAKRPRT  60
   61 PRPRYSPEAQ RRTNSRLSAL TIDTNRSNDL NVDGSAPSSS SAASCGLSTP DPDRTSQQRR 120
  121 KGNQSAARSR KIKTPSPPLS QEDEPMELDS DDDPVNELDN LPIVIDDPSY VLTKEHKEIF 180
  181 EQVKKSVSDR NEFSPAQISE IYRSSKGEQA RLPERIHFGA FIMKTWYGSP FPAEFINVKK 240
  241 LFICEFCFFY ARSDEIMQNH AKKCMLRAPP GLEIYRKGDI SVFEVDGRLQ KEYCQTLCLV 300
  301 SRMFLESKTV FYDTEPFFFY IVTINDDIGC HFAGYFSKEK YEPDVNNLSC IMTLPCYQEM 360
  361 GLGRFLIDIS YALSRKEKWF GGPEQPLSEL GRKAYGGYWR TTIASCLGRL KDELEFGSGI 420
  421 SIKMIADDTG VNCHDILEVV CSLGWAKPVD PDEKNHYKLE WDVDWDMVSI ILRESEASKE 480
  481 TKVQYDPECL DWVPRKMRPS MDGYHELSKE EIEQDEQRRK SIQKTPVHVS MEKATPTSTT 540
  541 SLPVGSVKKV RKRRFQFGMK HRKRNNTC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..104] PSI-BLAST 11.39794 Solution Structure of the Tudor Domain from Mouse Hypothetical Protein Homologous to Histone Acetyltransferase
    2 View Details [105..201] deduced N/A No confident structure predictions are available.
    3 View Details [202..568] PSI-BLAST 114.0 No description for 2ozuA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.52947930150666 bayes_pls_golite062009
  • protein binding
    		•  0.79852803292134 bayes_pls_golite062009
  • chromatin binding
    		•  0.59406059827838 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.13486860077524 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle