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Protein Overview: gi|7486205, gi|1...

General Information:
Name(s) found: gi|7486205 [NCBI NR]
gi|7269674 [NCBI NR]
gi|30725462 [NCBI NR]
gi|18252169 [NCBI NR]
gi|15234413 [NCBI NR]
Description(s) found:
Found 16 descriptions.
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  • pir||T09036 hypothetical protein F26K10.80 - Arabidopsis thaliana [NCBI NR]
  • gi|7269674|emb|CAB79622.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30725462|gb|AAP37753.1| At4g28200 [Arabidopsis thaliana] [NCBI NR]
  • gi|18252169|gb|AAL61917.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15234413|ref|NP_194549.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 648 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: RNA processing [IEA]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADVVQYRLE RMVDELDDLE RREIFTRAEI AEIVKQRRKF EYRLKRPSPL KEDFIAYIDY  60
   61 EVKLDELRQL RRKSVARVTK KRKKKSVSDF AGVARIVEIY RLATMRYKGD INLWFRYLEF 120
  121 CKQKRHGRMK KALAQAIRFH PKVAGVWIYA ASWEFDRNLN VTAARALMLN GLRVCSNSED 180
  181 LWVEYLRMEL TFLNKLKARK VALGEDKGSL VRDTKTVEDE QWKDENKELF MSLDEKEGNE 240
  241 KEENDEDSIV EDVEDVTEKV DFLKEKGSNV LQTIYSGAVE AIPSSFDLRK RFLEILEATD 300
  301 LAHSDEMRNT ILSDLKRDFC NEPEYWNWLA RHEMSGCISN EAGLEFANPQ MQKAIQVFEE 360
  361 GLQTVTSSSM FEIYINFLME AIVQSNGDEN EISSLSNPII SHIINVYQKA DETGCLTEEL 420
  421 ADEYVSLYLK LEKTHEAQKL AEKLCSEKFA GSAKLWLSRV SIEIRSLSEN SSPSKADFQT 480
  481 VFELLSNALR KVPISESESL WLMAFNFFAH QRTYLDKLVE MSILSATKSH GSDHVFSLAS 540
  541 TVVKFVLETK GAHSARKIYK RFLALPGPSL VLYKGCIEIE TNLISVGDKD GLSNARKLYD 600
  601 SAVASYGQDV ELWKNYYSLE TKLGTSETAN GVYWRARKTL NESADFIV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..72] PSI-BLAST 6.30103 Helicobacter cysteine rich protein C (HcpC)
    2 View Details [73..648] PSI-BLAST 5.045757 Clathrin D6 Coat


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle