YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|20260566, gi|...

General Information:
Name(s) found: gi|31711822 [NCBI NR]
gi|25387429 [NCBI NR]
gi|2281093 [NCBI NR]
gi|20260566 [NCBI NR]
gi|15224356 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|31711822|gb|AAP68267.1| At2g43770 [Arabidopsis thaliana] [NCBI NR]
  • pir||C84870 probable splicing factor [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|2281093|gb|AAB64029.1| putative splicing factor [Arabidopsis thaliana] [NCBI NR]
  • gi|20260566|gb|AAM13181.1| putative splicing factor [Arabidopsis thaliana] [NCBI NR]
  • gi|15224356|ref|NP_181905.1| transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] [NCBI NR]
  • (O22826) Putative splicing factor (At2g43770) [athaliana3702.FASTAC.txt]
  • At2g43770 [Arabidopsis thaliana]gi|20260566|gb|AAM13181.1| putative splicing factor [Arabidopsis thaliana]gi|2281093|gb|AAB64029.1| putative splicing factor [Arabidopsis thaliana]gi|25387429|pir||C84870 probable splicing factor [imported] - Arabidopsis [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Transducin family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | transducin family protein / WD-40 repeat family protein | chr2:18141349-18142380 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At2g43770 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • nucleotide binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative splicing factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr2:18134272-18135303 REVERSE LENGTH=343 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At2g43770 OS=Arabidopsis thaliana GN=At2g43770 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 343 amino acids

    Gene Ontology:
    Cellular Component: heterotrimeric G-protein complex [ISS]
    CUL4 RING ubiquitin ligase complex [ISS]
    Biological Process: biological_process [ND]
    Molecular Function: nucleotide binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIMSRENET ALSGPRPMEW STVPHSASQG PGPNGKNRTS SLEAPIMLLS GHPSAVYTMK  60
   61 FNPAGTLIAS GSHDREIFLW RVHGDCKNFM VLKGHKNAIL DLHWTSDGSQ IVSASPDKTV 120
  121 RAWDVETGKQ IKKMAEHSSF VNSCCPTRRG PPLIISGSDD GTAKLWDMRQ RGAIQTFPDK 180
  181 YQITAVSFSD AADKIFTGGV DNDVKVWDLR KGEATMTLEG HQDTITGMSL SPDGSYLLTN 240
  241 GMDNKLCVWD MRPYAPQNRC VKIFEGHQHN FEKNLLKCSW SPDGTKVTAG SSDRMVHIWD 300
  301 TTSRRTIYKL PGHTGSVNEC VFHPTEPIIG SCSSDKNIYL GEI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..343] PSI-BLAST 75.154902 No description for 2gnqA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle