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View Structure Prediction Details

Protein: gi|20260566, gi|...
Organism: Arabidopsis thaliana
Length: 343 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20260566, gi|....

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
421.0 [0..1] [343..1364]

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Predicted Domain #1
Region A:
Residues: [1-343]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIMSRENET ALSGPRPMEW STVPHSASQG PGPNGKNRTS SLEAPIMLLS GHPSAVYTMK  60
   61 FNPAGTLIAS GSHDREIFLW RVHGDCKNFM VLKGHKNAIL DLHWTSDGSQ IVSASPDKTV 120
  121 RAWDVETGKQ IKKMAEHSSF VNSCCPTRRG PPLIISGSDD GTAKLWDMRQ RGAIQTFPDK 180
  181 YQITAVSFSD AADKIFTGGV DNDVKVWDLR KGEATMTLEG HQDTITGMSL SPDGSYLLTN 240
  241 GMDNKLCVWD MRPYAPQNRC VKIFEGHQHN FEKNLLKCSW SPDGTKVTAG SSDRMVHIWD 300
  301 TTSRRTIYKL PGHTGSVNEC VFHPTEPIIG SCSSDKNIYL GEI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 75.154902
Match: 2gnqA
Description: No description for 2gnqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle